BLASTX nr result

ID: Cnidium21_contig00036989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036989
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containi...   209   1e-52
emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]   209   1e-52
ref|XP_002326752.1| predicted protein [Populus trichocarpa] gi|2...   207   9e-52
ref|XP_003612704.1| Pentatricopeptide repeat-containing protein ...   204   6e-51
ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50

>ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Vitis vinifera] gi|297742017|emb|CBI33804.3| unnamed
           protein product [Vitis vinifera]
          Length = 605

 Score =  209 bits (533), Expect = 1e-52
 Identities = 99/153 (64%), Positives = 126/153 (82%)
 Frame = +2

Query: 2   HAGLVEEGLQLFNRIKNEHKIEPTIQHYGCLVDLLGRSGRLDEAFEIIKDMPMEPNDVVW 181
           HAGLV+EGLQ FNR+K EH IEPTIQHYGC+VDL+GR+G++DEA E+IK MPMEPNDV+W
Sbjct: 346 HAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLW 405

Query: 182 RSLLGACKSYSNIQLGEIAAEKLMQMKLINASDYLVLSHIYAEAQRWKDVAITRTKMAES 361
           RSLL A K ++N+Q GEIAA++L ++    ASDY+VLS++YA+AQRW+DVA TRT M   
Sbjct: 406 RSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSK 465

Query: 362 GLTKTPGFSFVEVKKKIYKFVSQDMTWPQCNGV 460
           GL++ PGFS VEVK+K+++FVSQD   PQ   V
Sbjct: 466 GLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESV 498


>emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
          Length = 562

 Score =  209 bits (533), Expect = 1e-52
 Identities = 99/153 (64%), Positives = 126/153 (82%)
 Frame = +2

Query: 2   HAGLVEEGLQLFNRIKNEHKIEPTIQHYGCLVDLLGRSGRLDEAFEIIKDMPMEPNDVVW 181
           HAGLV+EGLQ FNR+K EH IEPTIQHYGC+VDL+GR+G++DEA E+IK MPMEPNDV+W
Sbjct: 303 HAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLW 362

Query: 182 RSLLGACKSYSNIQLGEIAAEKLMQMKLINASDYLVLSHIYAEAQRWKDVAITRTKMAES 361
           RSLL A K ++N+Q GEIAA++L ++    ASDY+VLS++YA+AQRW+DVA TRT M   
Sbjct: 363 RSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSK 422

Query: 362 GLTKTPGFSFVEVKKKIYKFVSQDMTWPQCNGV 460
           GL++ PGFS VEVK+K+++FVSQD   PQ   V
Sbjct: 423 GLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESV 455


>ref|XP_002326752.1| predicted protein [Populus trichocarpa] gi|222834074|gb|EEE72551.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  207 bits (526), Expect = 9e-52
 Identities = 95/153 (62%), Positives = 125/153 (81%)
 Frame = +2

Query: 2   HAGLVEEGLQLFNRIKNEHKIEPTIQHYGCLVDLLGRSGRLDEAFEIIKDMPMEPNDVVW 181
           HAGLV+EGLQ FNR+K EH IEPTIQHYGC+V L+GR+G L++A E I+ MP++PN+VVW
Sbjct: 300 HAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVW 359

Query: 182 RSLLGACKSYSNIQLGEIAAEKLMQMKLINASDYLVLSHIYAEAQRWKDVAITRTKMAES 361
           R LL ACK + N+++GEIAA+ L ++   N  DY+VLS++YA A+RW+DVA  RT+MA  
Sbjct: 360 RGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARK 419

Query: 362 GLTKTPGFSFVEVKKKIYKFVSQDMTWPQCNGV 460
           G T+TPGFS V+V++KIYKFVSQDM+ PQC G+
Sbjct: 420 GFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGM 452


>ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514039|gb|AES95662.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 572

 Score =  204 bits (519), Expect = 6e-51
 Identities = 94/151 (62%), Positives = 121/151 (80%)
 Frame = +2

Query: 2   HAGLVEEGLQLFNRIKNEHKIEPTIQHYGCLVDLLGRSGRLDEAFEIIKDMPMEPNDVVW 181
           HAGLVEEGLQ F  ++ EHKIEPT+QHYGC+VDLLGR G L EA+E+IK M ++PNDV+W
Sbjct: 313 HAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIW 372

Query: 182 RSLLGACKSYSNIQLGEIAAEKLMQMKLINASDYLVLSHIYAEAQRWKDVAITRTKMAES 361
           RSLL ACK + N+++G+IAAE L  +   N+ DYLVL+++YA+AQ+W DVA  RTK+AE 
Sbjct: 373 RSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAER 432

Query: 362 GLTKTPGFSFVEVKKKIYKFVSQDMTWPQCN 454
            L +TPGFS +E K+K+YKFVSQD + PQ N
Sbjct: 433 NLVQTPGFSLIEAKRKVYKFVSQDKSIPQWN 463


>ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 604

 Score =  203 bits (516), Expect = 1e-50
 Identities = 92/153 (60%), Positives = 121/153 (79%)
 Frame = +2

Query: 2   HAGLVEEGLQLFNRIKNEHKIEPTIQHYGCLVDLLGRSGRLDEAFEIIKDMPMEPNDVVW 181
           HAGLV EGLQ FNR++ EHKI+PTIQHYGC+VDL+GR+G L  A+++IK MP++PNDVVW
Sbjct: 345 HAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVW 404

Query: 182 RSLLGACKSYSNIQLGEIAAEKLMQMKLINASDYLVLSHIYAEAQRWKDVAITRTKMAES 361
           RSLL ACK + N+++GEIAAE + ++   N  DYLVL+++YA A++W DVA  RT+MAE 
Sbjct: 405 RSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKKWADVARIRTEMAEK 464

Query: 362 GLTKTPGFSFVEVKKKIYKFVSQDMTWPQCNGV 460
            L +TPGFS VE  + +YKFVSQD + PQC  +
Sbjct: 465 HLVQTPGFSLVEANRNVYKFVSQDKSQPQCETI 497


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