BLASTX nr result
ID: Cnidium21_contig00036981
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00036981 (497 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788... 145 4e-33 ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ... 140 1e-31 emb|CBI36057.3| unnamed protein product [Vitis vinifera] 139 2e-31 ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik... 139 3e-31 ref|XP_002515963.1| DNA repair/transcription protein met18/mms19... 136 2e-30 >ref|XP_003546956.1| PREDICTED: uncharacterized protein LOC100788537 [Glycine max] Length = 1135 Score = 145 bits (365), Expect = 4e-33 Identities = 76/149 (51%), Positives = 97/149 (65%) Frame = +2 Query: 14 MADSTHCVKHIESFVDSSSTPXXXXXXXXXXXXLVKNDILKLESLVREMELYLTTTDSFX 193 MA++T +HIES+VDSSSTP LV D L LE+LVRE+E+YLTTTD+ Sbjct: 1 MAETTQLTRHIESYVDSSSTPAQQASSLNAVASLVNTDALPLEALVRELEMYLTTTDNVV 60 Query: 194 XXXXXXXXXXXXXXXXSKPLENETVLSLIGFFTERLVDWKALHGALIGCLSLLRRKGNVG 373 SKPL + T+ SL+GFF +RL DW+A+ GAL+GCL+L+RRK VG Sbjct: 61 RARGILLLAEVMTRIESKPLNSATIHSLVGFFKDRLADWRAVQGALVGCLALIRRKSVVG 120 Query: 374 IVSGSKALAVAQSFLQNVQVQSLRQSDRK 460 +V+ S A +AQSFLQ +QVQSL Q DRK Sbjct: 121 MVTDSDATTIAQSFLQYMQVQSLGQYDRK 149 >ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis sativus] Length = 1147 Score = 140 bits (353), Expect = 1e-31 Identities = 75/149 (50%), Positives = 95/149 (63%) Frame = +2 Query: 14 MADSTHCVKHIESFVDSSSTPXXXXXXXXXXXXLVKNDILKLESLVREMELYLTTTDSFX 193 MA+ ++ESFVD S TP LVKN++L +E+LVREM +YLT TD+ Sbjct: 1 MAELCKLTHYVESFVDVSRTPSQQATSLETITSLVKNNVLTIETLVREMGMYLTITDNII 60 Query: 194 XXXXXXXXXXXXXXXXSKPLENETVLSLIGFFTERLVDWKALHGALIGCLSLLRRKGNVG 373 SKPL++ T+ SLI FFTERL DWKAL GAL+GCL+L+RRK NVG Sbjct: 61 RGRGILLLGELLACLASKPLDSATIHSLIAFFTERLADWKALRGALVGCLALMRRKTNVG 120 Query: 374 IVSGSKALAVAQSFLQNVQVQSLRQSDRK 460 +S + A +VAQS+ QN+QVQSL Q DRK Sbjct: 121 SISQNDAKSVAQSYFQNLQVQSLGQHDRK 149 >emb|CBI36057.3| unnamed protein product [Vitis vinifera] Length = 1146 Score = 139 bits (350), Expect = 2e-31 Identities = 75/149 (50%), Positives = 97/149 (65%) Frame = +2 Query: 14 MADSTHCVKHIESFVDSSSTPXXXXXXXXXXXXLVKNDILKLESLVREMELYLTTTDSFX 193 MA + ++IES+VDSS + L+KNDIL LE+LV EM +YLTTTD+ Sbjct: 1 MAQLSQLTQYIESYVDSSRSSTQQAASVDAIAYLLKNDILTLETLVTEMGMYLTTTDNII 60 Query: 194 XXXXXXXXXXXXXXXXSKPLENETVLSLIGFFTERLVDWKALHGALIGCLSLLRRKGNVG 373 SKPL+N T+ SLI FFT+RL DW+AL GALIGCL+L++RK N+G Sbjct: 61 RTRGILLLAELLTRLASKPLDNVTIHSLISFFTDRLADWRALRGALIGCLALMKRKSNMG 120 Query: 374 IVSGSKALAVAQSFLQNVQVQSLRQSDRK 460 V+ + A AVAQ++L+NVQVQSL Q DRK Sbjct: 121 RVTDNDARAVAQAYLENVQVQSLGQHDRK 149 >ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide excision repair protein-like protein [Medicago truncatula] Length = 1140 Score = 139 bits (349), Expect = 3e-31 Identities = 71/149 (47%), Positives = 99/149 (66%) Frame = +2 Query: 14 MADSTHCVKHIESFVDSSSTPXXXXXXXXXXXXLVKNDILKLESLVREMELYLTTTDSFX 193 MA++T +HIES+VDSSSTP L+K + L LE+LVRE+++YLT+TD+ Sbjct: 1 MAETTQLTRHIESYVDSSSTPSHQVASLDAIVLLIKTNALTLEALVRELDMYLTSTDTLI 60 Query: 194 XXXXXXXXXXXXXXXXSKPLENETVLSLIGFFTERLVDWKALHGALIGCLSLLRRKGNVG 373 S L+++T+ SL+GFF ER+ DWKA+ GAL+GCL+L+RRK VG Sbjct: 61 RSRGILLLAEVLTRINSISLDSKTIHSLVGFFKERMADWKAVRGALVGCLALIRRKSVVG 120 Query: 374 IVSGSKALAVAQSFLQNVQVQSLRQSDRK 460 +V+GS A ++ QSFLQ++QVQSL DRK Sbjct: 121 MVTGSDAKSITQSFLQHLQVQSLGLYDRK 149 >ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus communis] gi|223544868|gb|EEF46383.1| DNA repair/transcription protein met18/mms19, putative [Ricinus communis] Length = 1174 Score = 136 bits (343), Expect = 2e-30 Identities = 73/149 (48%), Positives = 96/149 (64%) Frame = +2 Query: 14 MADSTHCVKHIESFVDSSSTPXXXXXXXXXXXXLVKNDILKLESLVREMELYLTTTDSFX 193 MA+ T ++IES+VD+S + L+KND + + SLV+EME+YLTTTD Sbjct: 1 MAEPTQLTQYIESYVDASRSLSQQAASLDAIVLLLKNDAVTIGSLVKEMEMYLTTTDDII 60 Query: 194 XXXXXXXXXXXXXXXXSKPLENETVLSLIGFFTERLVDWKALHGALIGCLSLLRRKGNVG 373 SKPL+N T+ SLI FFTERL DW+AL GAL+GCL+L+RR+ N G Sbjct: 61 RARGILLLGEALSHLSSKPLDNTTIHSLIAFFTERLADWRALRGALVGCLALIRRRSN-G 119 Query: 374 IVSGSKALAVAQSFLQNVQVQSLRQSDRK 460 I++G A VA+S+LQN+QVQSL Q DRK Sbjct: 120 IITGIDAKVVAESYLQNLQVQSLAQYDRK 148