BLASTX nr result

ID: Cnidium21_contig00036979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036979
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    77   2e-12
ref|XP_002515720.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    68   9e-10
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    59   3e-07
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    58   7e-07

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/82 (45%), Positives = 51/82 (62%)
 Frame = -1

Query: 278 K*SKPPQGWVKINVDAACRWGQDFIGVGCVIRDEQGQIMRARMSRVGGRIPPREAEAYSL 99
           K +KP  GW+KIN D A    Q  IG+GCV+RD  G+++ AR  R  GR   REAEA S+
Sbjct: 587 KWTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALSM 646

Query: 98  REAMIWTSQWRKTKCIFETDVK 33
           +EA+ +   ++  KC FE D +
Sbjct: 647 KEALSYMKDYQMDKCFFELDAQ 668


>ref|XP_002515720.1| conserved hypothetical protein [Ricinus communis]
           gi|223545157|gb|EEF46667.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/86 (40%), Positives = 53/86 (61%)
 Frame = -1

Query: 269 KPPQGWVKINVDAACRWGQDFIGVGCVIRDEQGQIMRARMSRVGGRIPPREAEAYSLREA 90
           KP +GWVK ++DAA       IG+G +  DE+G+ ++ +   + GRI  +EAEA  L+EA
Sbjct: 38  KPARGWVKCDMDAATFENGRVIGIGLMSMDEEGRFVKGKSFCMNGRIAIKEAEAMGLKEA 97

Query: 89  MIWTSQWRKTKCIFETDVKVVVDAIH 12
           + W  +    + IFE+D KVV+ A H
Sbjct: 98  LSWCLEQGLQRVIFESDAKVVMGAFH 123


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/85 (40%), Positives = 52/85 (61%)
 Frame = -1

Query: 266 PPQGWVKINVDAACRWGQDFIGVGCVIRDEQGQIMRARMSRVGGRIPPREAEAYSLREAM 87
           P  G++K NVDAA    Q+  G G  +RD++G+ ++A  +   G  PP+EAEA  LR+A+
Sbjct: 60  PAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAI 119

Query: 86  IWTSQWRKTKCIFETDVKVVVDAIH 12
           +W  Q   +    E D K+VVD+I+
Sbjct: 120 LWLGQLELSNVQLELDCKLVVDSIY 144


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = -1

Query: 266 PPQ-GWVKINVDAACRWGQDFIGVGCVIRDEQGQIMRARMSRVGGRIPPREAEAYSLREA 90
           PPQ G+VK NVD A        G G VIRD  G  +        G    + AEA  LREA
Sbjct: 170 PPQPGFVKCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREA 229

Query: 89  MIWTSQWRKTKCIFETDVKVVVDAIHAG 6
           + W     ++  IFE D KVVVDA+ +G
Sbjct: 230 VQWVLSLGRSNVIFEYDAKVVVDAVLSG 257


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/90 (37%), Positives = 46/90 (51%)
 Frame = -1

Query: 278 K*SKPPQGWVKINVDAACRWGQDFIGVGCVIRDEQGQIMRARMSRVGGRIPPREAEAYSL 99
           K SKP  G +K NVDA        IG+G ++R+E G +       V G   P+ AEA  L
Sbjct: 355 KWSKPSPGMLKCNVDAXIFSKHQTIGLGVILRNEFGSVXGCYSKVVNGVSSPKXAEALGL 414

Query: 98  REAMIWTSQWRKTKCIFETDVKVVVDAIHA 9
           REA  W  + R +  I E D K V D+ ++
Sbjct: 415 REAARWLLELRVSNVIVELDAKGVYDSFYS 444


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