BLASTX nr result

ID: Cnidium21_contig00036978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036978
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566604.1| reticulon-like protein B9 [Arabidopsis thaliana...   243   4e-62
gb|AAM64795.1| unknown [Arabidopsis thaliana]                         243   5e-62
ref|XP_002318538.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61
ref|XP_003528960.1| PREDICTED: reticulon-like protein B9-like [G...   237   3e-60
ref|XP_004137485.1| PREDICTED: reticulon-like protein B9-like [C...   236   4e-60

>ref|NP_566604.1| reticulon-like protein B9 [Arabidopsis thaliana]
           gi|75273624|sp|Q9LJQ5.1|RTNLI_ARATH RecName:
           Full=Reticulon-like protein B9; Short=AtRTNLB9
           gi|9279659|dbj|BAB01175.1| seed maturation protein-like
           [Arabidopsis thaliana] gi|89111912|gb|ABD60728.1|
           At3g18260 [Arabidopsis thaliana]
           gi|332642552|gb|AEE76073.1| reticulon-like protein B9
           [Arabidopsis thaliana]
          Length = 225

 Score =  243 bits (620), Expect = 4e-62
 Identities = 114/223 (51%), Positives = 164/223 (73%), Gaps = 5/223 (2%)
 Frame = -2

Query: 812 MPIF---SSDSEDE--VAPSSKLFSRERSVHTLLGGGQVADVLLWRDKKLSSAIMAVVTV 648
           MPIF   SSDSEDE  +  ++KLF+R+RS+H++ GGG+VAD+LLWR+ K+++ ++  V++
Sbjct: 1   MPIFTGSSSDSEDERTIHKTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSI 60

Query: 647 IWFLFEVVEYNFITLLCHIFITTMLVIFIWSTAADLLNWAPPQIPKMVLQDSIFRDIAST 468
           +WFL EVVEYNFITL+CH  +T+ML  FIWSTA+D LNW  P IP++VL +S F+ +A +
Sbjct: 61  LWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARS 120

Query: 467 FHVKFNKLLSQLIYIACGNDLKLFAMAVLFLWLVSLIGNYIXXXXXXXXXXXXLETLPFL 288
           FHV+FN++L++L+ +ACG D  LF +  + L++VS+IG Y             ++TLP +
Sbjct: 121 FHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVM 180

Query: 287 YERYEKEVDYLVGKVYRKMRKIYKKFDSNVLDKIPRGPMNGKK 159
           YE YE +VD   GK+ RKM+K+YKK D+NVL KIPRG +  KK
Sbjct: 181 YEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223


>gb|AAM64795.1| unknown [Arabidopsis thaliana]
          Length = 225

 Score =  243 bits (619), Expect = 5e-62
 Identities = 114/223 (51%), Positives = 164/223 (73%), Gaps = 5/223 (2%)
 Frame = -2

Query: 812 MPIF---SSDSEDE--VAPSSKLFSRERSVHTLLGGGQVADVLLWRDKKLSSAIMAVVTV 648
           MPIF   SSDSEDE  +  ++KLF+R+RS+H++ GGG+VAD+LLWR+ K+++ ++  V++
Sbjct: 1   MPIFTGSSSDSEDERTIHKTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSI 60

Query: 647 IWFLFEVVEYNFITLLCHIFITTMLVIFIWSTAADLLNWAPPQIPKMVLQDSIFRDIAST 468
           +WFL EVVEYNFITL+CH  +T+ML  FIWSTA+D LNW  P IP++VL +S F+ +A +
Sbjct: 61  LWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPIIPEVVLDESSFKQLARS 120

Query: 467 FHVKFNKLLSQLIYIACGNDLKLFAMAVLFLWLVSLIGNYIXXXXXXXXXXXXLETLPFL 288
           FHV+FN++L++L+ +ACG D  LF +  + L++VS+IG Y             ++TLP +
Sbjct: 121 FHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFMNLLFIGFVIMQTLPVM 180

Query: 287 YERYEKEVDYLVGKVYRKMRKIYKKFDSNVLDKIPRGPMNGKK 159
           YE YE +VD   GK+ RKM+K+YKK D+NVL KIPRG +  KK
Sbjct: 181 YEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223


>ref|XP_002318538.1| predicted protein [Populus trichocarpa] gi|222859211|gb|EEE96758.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  241 bits (614), Expect = 2e-61
 Identities = 113/219 (51%), Positives = 157/219 (71%), Gaps = 1/219 (0%)
 Frame = -2

Query: 812 MPIFSSDSEDEVAPSSKLFSRERSVHTLLGGGQVADVLLWRDKKLSSAIMAVVTVIWFLF 633
           MPI+SSDS++E  P +KLF R+R + ++LGGGQVA VLLW +KK+S+A+   +T++WFLF
Sbjct: 1   MPIYSSDSDNETTPRTKLFGRQRPIRSVLGGGQVAGVLLWENKKVSAALSFGMTILWFLF 60

Query: 632 EVVEYNFITLLCHIFITTMLVIFIWSTAADLLNWAPPQIPKMVLQDSIFRDIASTFHVKF 453
           EV EYNF+TL  HI IT ML++FIW T+A+  NW PP IP+ +L  S F + A TFH +F
Sbjct: 61  EVAEYNFVTLFSHISITAMLIVFIWCTSAEFFNWNPPAIPRSILDKSTFHEFALTFHERF 120

Query: 452 NKLLSQLIYIACGNDLKLFAMAVLFLWLVSLIGNYIXXXXXXXXXXXXLETLPFLYERYE 273
           N+ LS  + IACG    LF +A+  L+++S+IGNY             L+TLPFLY +YE
Sbjct: 121 NQALSSFVDIACGKQPALFFVAIFCLYILSVIGNYFTFLNFLYLCFVCLQTLPFLYNKYE 180

Query: 272 KEVDYLVGKVYRKMRKIYKKFDSNVLDKIPRG-PMNGKK 159
            EV+   GK+ R+++K+Y++FDSNVL+KIPRG P+  KK
Sbjct: 181 DEVERYAGKLTREVKKMYRRFDSNVLNKIPRGVPVKEKK 219


>ref|XP_003528960.1| PREDICTED: reticulon-like protein B9-like [Glycine max]
          Length = 222

 Score =  237 bits (604), Expect = 3e-60
 Identities = 110/215 (51%), Positives = 158/215 (73%), Gaps = 1/215 (0%)
 Frame = -2

Query: 800 SSDSEDEVAPS-SKLFSRERSVHTLLGGGQVADVLLWRDKKLSSAIMAVVTVIWFLFEVV 624
           SSDSE+E+  + +KLF  E+ +H +LGGG+VAD+LLWRD+ +S A++  +TVIWFLFE+V
Sbjct: 6   SSDSENEIIGARAKLFGHEKPIHEVLGGGKVADMLLWRDRYVSGALLGGMTVIWFLFEIV 65

Query: 623 EYNFITLLCHIFITTMLVIFIWSTAADLLNWAPPQIPKMVLQDSIFRDIASTFHVKFNKL 444
           EYNF+ LLCHI ITTMLV+FIWST AD+  W  PQIP +VLQ+S F D+AS  H +FN+L
Sbjct: 66  EYNFVALLCHISITTMLVLFIWSTVADIFKWKGPQIPNIVLQESFFHDLASILHKRFNQL 125

Query: 443 LSQLIYIACGNDLKLFAMAVLFLWLVSLIGNYIXXXXXXXXXXXXLETLPFLYERYEKEV 264
           L  L++I+CG DL +F + ++ L+++S+IG+Y             ++TLP +YERYE+E+
Sbjct: 126 LPMLLHISCGIDLPIFLLNIVSLYILSVIGSYFSFVNLLYIGFLCMQTLPIVYERYEEEI 185

Query: 263 DYLVGKVYRKMRKIYKKFDSNVLDKIPRGPMNGKK 159
           +  V  +   +RK Y++F+ N L+KIPRGP+  KK
Sbjct: 186 NNWVSDIIIVIRKNYRRFNKNYLNKIPRGPVKAKK 220


>ref|XP_004137485.1| PREDICTED: reticulon-like protein B9-like [Cucumis sativus]
           gi|449518549|ref|XP_004166304.1| PREDICTED:
           reticulon-like protein B9-like [Cucumis sativus]
          Length = 219

 Score =  236 bits (603), Expect = 4e-60
 Identities = 106/213 (49%), Positives = 154/213 (72%)
 Frame = -2

Query: 797 SDSEDEVAPSSKLFSRERSVHTLLGGGQVADVLLWRDKKLSSAIMAVVTVIWFLFEVVEY 618
           SDS+D+  P SKLF R R V+ + GGG+VAD+LLW+DKK S+ ++  +TV+WFLFE+VEY
Sbjct: 5   SDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFEIVEY 64

Query: 617 NFITLLCHIFITTMLVIFIWSTAADLLNWAPPQIPKMVLQDSIFRDIASTFHVKFNKLLS 438
           NF+TL+CH+ IT+ML+ FIW T A+   W PP++P+ +L++S F+D+AST H + N+  +
Sbjct: 65  NFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRINQFFT 124

Query: 437 QLIYIACGNDLKLFAMAVLFLWLVSLIGNYIXXXXXXXXXXXXLETLPFLYERYEKEVDY 258
           ++  IA G DL LF +A++ L+L+S+IG+Y+            LETLPFLYE+YE+EVD 
Sbjct: 125 KIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDQ 184

Query: 257 LVGKVYRKMRKIYKKFDSNVLDKIPRGPMNGKK 159
           L G    + +K Y+ FD+  L+KIPRGP+  KK
Sbjct: 185 LAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKK 217


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