BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036972
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    59   3e-07

>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
 Frame = +1

Query: 1   KDTMTRFGMNVNLDCALCVGYAENHEHLFCGCAYTRSILNYWPVPISTLWQDLKDDNAVG 180
           +D +T++G+N+   C LC    E H+HLF  C ++  I +++ +        L     + 
Sbjct: 182 RDRLTQWGLNIPTVCVLCNVVDETHDHLFFQCQFSNEIWSFFMIRAGMTPPHLFGPILLW 241

Query: 181 ANMLDDIR--SNITYLFITASFYSVWMEHNRRIHNTH-RMPAILLAEIKRNLRDKL 339
                  +  S I  L   AS Y +W E N RIH TH R P  ++ E+++ +R +L
Sbjct: 242 LKSASSSKNLSLIIKLLFQASVYLIWRERNCRIHTTHSRTPPTIIKEVQQLIRARL 297