BLASTX nr result

ID: Cnidium21_contig00036953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036953
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234318.1| root-specific metal transporter [Solanum lyc...    98   8e-19
dbj|BAM34952.1| metal transporter Nramp1 [Solanum torvum]              97   2e-18
dbj|BAM34953.1| metal transporter Nramp1 [Solanum melongena]           95   5e-18
ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|2...    95   7e-18
gb|AFK49142.1| unknown [Medicago truncatula]                           94   9e-18

>ref|NP_001234318.1| root-specific metal transporter [Solanum lycopersicum]
           gi|30267434|gb|AAP21818.1| root-specific metal
           transporter [Solanum lycopersicum]
          Length = 530

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/92 (54%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
 Frame = +2

Query: 2   IGINIYYLITAFVGWITDNSLPKVANVFIGIIVFPFIAVYIISVIYLMFRXXXXXXXXXX 181
           IGINIYYL TAFVGW+  N+LPKV NV IGI+VFP +A+YI++VIYLMFR          
Sbjct: 439 IGINIYYLSTAFVGWLISNNLPKVGNVLIGIVVFPLMAIYILAVIYLMFRKDKVVTYIDP 498

Query: 182 XXXAESN---DVFELEQAIPYREDLADIQLPK 268
                     +  EL   +PYREDLADI LP+
Sbjct: 499 IKDDHMENGINSMELVDRVPYREDLADIPLPQ 530


>dbj|BAM34952.1| metal transporter Nramp1 [Solanum torvum]
          Length = 534

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
 Frame = +2

Query: 2   IGINIYYLITAFVGWITDNSLPKVANVFIGIIVFPFIAVYIISVIYLMF---RXXXXXXX 172
           IGINIYYL TAFVGW+ +N LPKV NV IGI+VFP +A+YI++VIYLMF   R       
Sbjct: 443 IGINIYYLSTAFVGWLLNNHLPKVGNVLIGIVVFPLMAIYILAVIYLMFRKDRVVTYINP 502

Query: 173 XXXXXXAESNDVFELEQAIPYREDLADIQLPK 268
                     +  EL   +PYREDL DI LP+
Sbjct: 503 IKDDHMENGTNSMELVDRVPYREDLVDIPLPQ 534


>dbj|BAM34953.1| metal transporter Nramp1 [Solanum melongena]
          Length = 531

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/92 (53%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
 Frame = +2

Query: 2   IGINIYYLITAFVGWITDNSLPKVANVFIGIIVFPFIAVYIISVIYLMFR---XXXXXXX 172
           IGINIYYL TAFVGW+ +NSLPKV NV IGI+VFP +A+YI++VIYLMFR          
Sbjct: 440 IGINIYYLSTAFVGWLLNNSLPKVGNVLIGILVFPLMAIYILAVIYLMFRKDKVVTYIDP 499

Query: 173 XXXXXXAESNDVFELEQAIPYREDLADIQLPK 268
                     +  EL   +PYREDL  I LP+
Sbjct: 500 IKDHHMENGTNNMELVDPVPYREDLVHIPLPQ 531


>ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|222856902|gb|EEE94449.1|
           nramp transporter [Populus trichocarpa]
          Length = 518

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 51/101 (50%), Positives = 64/101 (63%), Gaps = 12/101 (11%)
 Frame = +2

Query: 2   IGINIYYLITAFVGWITDNSLPKVANVFIGIIVFPFIAVYIISVIYLMFR---------- 151
           IG+NIYYL T FVGW+ DN+LPKV NVFIGIIVFP +A+YI++VIYL FR          
Sbjct: 419 IGVNIYYLSTGFVGWLIDNNLPKVGNVFIGIIVFPLMAIYILAVIYLTFRKDSVVTFLGP 478

Query: 152 --XXXXXXXXXXXXXAESNDVFELEQAIPYREDLADIQLPK 268
                           +S +  E+E+ +PYREDLADI LP+
Sbjct: 479 NKNDPQQQANMENGLTKSTEGPEMER-VPYREDLADIPLPE 518


>gb|AFK49142.1| unknown [Medicago truncatula]
          Length = 123

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 54/98 (55%), Positives = 61/98 (62%), Gaps = 9/98 (9%)
 Frame = +2

Query: 2   IGINIYYLITAFVGWITDNSLPKVANVFIGIIVFPFIAVYIISVIYLMFRXXXXXXXXXX 181
           IGIN+YYLITAFVGWI  NSLPKVANVFIG+IVFP +A+YI+SVIYL FR          
Sbjct: 22  IGINVYYLITAFVGWIIHNSLPKVANVFIGLIVFPLMALYIVSVIYLTFRKDTVVTFVEV 81

Query: 182 XXXAESNDVFE--------LEQA-IPYREDLADIQLPK 268
                     E        LE +  PYREDLADI  P+
Sbjct: 82  KDDPSMQTHVEKGFVNDGQLELSYTPYREDLADITRPE 119


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