BLASTX nr result

ID: Cnidium21_contig00036939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036939
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310075.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002306381.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002523770.1| conserved hypothetical protein [Ricinus comm...    92   3e-17
ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160...    88   8e-16
ref|XP_002874112.1| hypothetical protein ARALYDRAFT_489172 [Arab...    82   6e-14

>ref|XP_002310075.1| predicted protein [Populus trichocarpa] gi|222852978|gb|EEE90525.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   KAIRGENDVDNGGETQGKLDPIVGMSIMMGTLAIMLIWGKLCAIICTCAWLYMVPRLRIK 180
           K  R END  NG ++     P VGMSI++ TL +ML WGKLCAI+CT AW Y VPRLR +
Sbjct: 206 KRPRKENDHQNGKKSD---HPFVGMSIIIMTLVLMLAWGKLCAILCTSAWFYFVPRLRSE 262

Query: 181 ESIR--LSSSSLDFESVEYKKKVVLEGLLQRDRRRL 282
           +S+   L S+   ++S EYKKKVV++G L+R RR +
Sbjct: 263 DSVSNGLISAESFYDSEEYKKKVVMDGFLERSRRSI 298


>ref|XP_002306381.1| predicted protein [Populus trichocarpa] gi|222855830|gb|EEE93377.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = +1

Query: 16  ENDVDNGGETQGKLDPIVGMSIMMGTLAIMLIWGKLCAIICTCAWLYMVPRLRIKESIRL 195
           END  NG     KLDP+VGMSI++ TL IML+WGKLCAI+C  AW Y VPRL  ++ ++ 
Sbjct: 227 ENDRPNGK----KLDPLVGMSIVVMTLMIMLLWGKLCAILCASAWFYFVPRLISEDDVKN 282

Query: 196 SSSSLDF--ESVEYKKKVVLEGLLQRDRRRLV 285
            S   +F  +S +YKKKVVLEG L+R R  ++
Sbjct: 283 GSIQREFNLDSEDYKKKVVLEGFLERKRHSVL 314


>ref|XP_002523770.1| conserved hypothetical protein [Ricinus communis]
           gi|223536982|gb|EEF38619.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
 Frame = +1

Query: 58  DPIVGMSIMMGTLAIMLIWGKLCAIICTCAWLYMVPRLRIKES---IRLSSSSLDFESVE 228
           DP++GMSI+M TL IML+WG+LCAI+CTCAWLY   RL+   S   I       DF S E
Sbjct: 204 DPVIGMSIVMVTLIIMLLWGRLCAILCTCAWLYFTRRLKTDMSPRQIEKIRGEPDFSSDE 263

Query: 229 YKKKVVLEGLLQRDRR 276
           YKK+VVLEG L+RD R
Sbjct: 264 YKKRVVLEGFLERDHR 279


>ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160-like [Glycine max]
          Length = 253

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 8/89 (8%)
 Frame = +1

Query: 40  ETQGKLDPIVGMSIMMGTLAIMLIWGKLCAIICTCAWLYMVPRLRIK-------ESIRLS 198
           + Q   DP+VGMS+++ TL IML WG+LCAI+CT AWLY  PR R         E ++ +
Sbjct: 164 KAQNAYDPVVGMSVLVVTLVIMLFWGRLCAILCTSAWLYCTPRFRKSGGYVNDDEDLQTT 223

Query: 199 -SSSLDFESVEYKKKVVLEGLLQRDRRRL 282
            S  +D +S EYKKKV++EGLL R+ R +
Sbjct: 224 KSKEVDLDSEEYKKKVIMEGLLGRNHRTM 252


>ref|XP_002874112.1| hypothetical protein ARALYDRAFT_489172 [Arabidopsis lyrata subsp.
           lyrata] gi|297319949|gb|EFH50371.1| hypothetical protein
           ARALYDRAFT_489172 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 47/108 (43%), Positives = 60/108 (55%), Gaps = 16/108 (14%)
 Frame = +1

Query: 1   KAIRGENDVDNGGETQGKLDPIVGMSIMMGTLAIMLIWGKLCAIICTCAWLYMVPRLR-- 174
           K IR ++     G    KLDP++G+SI+M TL IML WG+LCAI+CT  W Y++PRL+  
Sbjct: 163 KEIREKSSRVRKGSRVAKLDPVIGISIIMLTLMIMLTWGRLCAILCTSTWCYILPRLKEA 222

Query: 175 -----IKESIRLSS---------SSLDFESVEYKKKVVLEGLLQRDRR 276
                + +  R  S           LD  S  YKKKVVLEG L R  R
Sbjct: 223 ATAVAVAKRKRNGSGKGEEGSFQGDLDLNSEAYKKKVVLEGFLVRQHR 270


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