BLASTX nr result
ID: Cnidium21_contig00036896
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00036896 (421 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38872.3| unnamed protein product [Vitis vinifera] 147 9e-34 ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi... 147 9e-34 ref|XP_002511699.1| pentatricopeptide repeat-containing protein,... 144 6e-33 ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|2... 142 2e-32 emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera] 139 2e-31 >emb|CBI38872.3| unnamed protein product [Vitis vinifera] Length = 379 Score = 147 bits (371), Expect = 9e-34 Identities = 73/131 (55%), Positives = 89/131 (67%), Gaps = 7/131 (5%) Frame = +3 Query: 48 MNICANLNQPWNSIHSTTTLFPSCKTQSDINQLHARLITTGLIKNSFLTTKLILSFTSSH 227 M I A NQPWNS H T L P KT D+NQ+H+RLITTG I N LTT++IL+F+SS Sbjct: 1 MLISATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSS 60 Query: 228 HTPLINFARYVL-------NFRNDSDPFVWNLVIKCFSHGDEPMQAVVLFVLMLEKGVFF 386 H PL+ FARY+ R +PF+WN +IK FSHG++P +A V+F LMLE GV Sbjct: 61 HKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCV 120 Query: 387 DKFSISLVLKA 419 DKFS SLVLKA Sbjct: 121 DKFSFSLVLKA 131 >ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like [Vitis vinifera] Length = 635 Score = 147 bits (371), Expect = 9e-34 Identities = 73/131 (55%), Positives = 89/131 (67%), Gaps = 7/131 (5%) Frame = +3 Query: 48 MNICANLNQPWNSIHSTTTLFPSCKTQSDINQLHARLITTGLIKNSFLTTKLILSFTSSH 227 M I A NQPWNS H T L P KT D+NQ+H+RLITTG I N LTT++IL+F+SS Sbjct: 1 MLISATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSS 60 Query: 228 HTPLINFARYVL-------NFRNDSDPFVWNLVIKCFSHGDEPMQAVVLFVLMLEKGVFF 386 H PL+ FARY+ R +PF+WN +IK FSHG++P +A V+F LMLE GV Sbjct: 61 HKPLVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCV 120 Query: 387 DKFSISLVLKA 419 DKFS SLVLKA Sbjct: 121 DKFSFSLVLKA 131 >ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223548879|gb|EEF50368.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 474 Score = 144 bits (364), Expect = 6e-33 Identities = 76/133 (57%), Positives = 94/133 (70%), Gaps = 9/133 (6%) Frame = +3 Query: 48 MNICANLNQ-PWNSIHSTTTLFPSCKTQSDINQLHARLITTGLIKNSFLTTKLILSFTSS 224 M ICA+ NQ PWNS ST L CKT SDINQ+HAR+ITTG IKN+ LTTK+ILS +SS Sbjct: 1 MLICASTNQQPWNSPLSTLILVRKCKTASDINQVHARMITTGFIKNTSLTTKIILSLSSS 60 Query: 225 HHTPLINFAR--------YVLNFRNDSDPFVWNLVIKCFSHGDEPMQAVVLFVLMLEKGV 380 + L FAR Y++ + DPF+WN VIK SHG++P QA+++F LML+ GV Sbjct: 61 PNVALHEFARYFFFTRHAYIIGAQEKEDPFLWNAVIKTHSHGNDPKQALIIFSLMLQNGV 120 Query: 381 FFDKFSISLVLKA 419 F DKFS+SLVLKA Sbjct: 121 FVDKFSVSLVLKA 133 >ref|XP_002320719.1| predicted protein [Populus trichocarpa] gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa] Length = 643 Score = 142 bits (359), Expect = 2e-32 Identities = 75/137 (54%), Positives = 94/137 (68%), Gaps = 13/137 (9%) Frame = +3 Query: 48 MNICANLNQ-PWNSIHSTTTLFPSCKTQSDINQLHARLITTGLIKNSFLTTKLILSFTSS 224 M + NLNQ PWNS T L CK SDINQ+HARL+TTG IKN+FLTTK+ILSF++S Sbjct: 1 MLLSGNLNQQPWNSAIPTLVLLKKCKRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTS 60 Query: 225 HHTPLINFARYVLNFRN------------DSDPFVWNLVIKCFSHGDEPMQAVVLFVLML 368 H PLI FAR++ FR+ + DPF+WN +IK +SHG +P +A+ L LML Sbjct: 61 LHAPLIEFARFIF-FRHHAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLML 119 Query: 369 EKGVFFDKFSISLVLKA 419 E G F DKF++SLVLKA Sbjct: 120 ENGAFADKFTLSLVLKA 136 >emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera] Length = 690 Score = 139 bits (350), Expect = 2e-31 Identities = 67/124 (54%), Positives = 85/124 (68%), Gaps = 7/124 (5%) Frame = +3 Query: 69 NQPWNSIHSTTTLFPSCKTQSDINQLHARLITTGLIKNSFLTTKLILSFTSSHHTPLINF 248 ++PWNS H T L P KT D+NQ+H+RLITTG I N LTT++IL+F+SS H PL+ F Sbjct: 64 HKPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEF 123 Query: 249 ARYVL-------NFRNDSDPFVWNLVIKCFSHGDEPMQAVVLFVLMLEKGVFFDKFSISL 407 ARY+ R +PF+WN +IK FSHG++P +A +F LMLE GV DKFS SL Sbjct: 124 ARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSL 183 Query: 408 VLKA 419 VLKA Sbjct: 184 VLKA 187