BLASTX nr result

ID: Cnidium21_contig00036895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036895
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   203   2e-50
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   202   3e-50
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   195   7e-48
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   193   2e-47
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   190   2e-46

>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  203 bits (517), Expect = 2e-50
 Identities = 102/220 (46%), Positives = 140/220 (63%), Gaps = 7/220 (3%)
 Frame = -1

Query: 652 AKSNVIFSTNTRAEDRVL------VCESLGVSEVLKPGNYLGMPMHVGRNKGEVFGFLTD 491
           A  N +F   T +E + +      +  SLGV   +  G YLG+P  VGRNK  +F +L D
Sbjct: 242 ADDNFLFCKATESEAQYVKDIISSITASLGVHNNIGSGKYLGLPSMVGRNKNAIFSYLKD 301

Query: 490 RIRQKLQGWMTKKLSKAGRVTLLKSAAQSIPNFWMSLFSIPKDVIVAIERLMNGFYWGRG 311
           RI +K Q W  + LS+A +  L+KS AQ+IP++ M  F IP  +   +ER+MN FYWG  
Sbjct: 302 RIWKKCQSWSVRSLSRADKEVLIKSVAQAIPSYCMGAFLIPASLCEELERMMNSFYWGSK 361

Query: 310 VNGK-GISWLAWDKLCLPKAVGGMGVKKLHKFNLAMLAKQGWRILNNENPLVTAILKARY 134
            NG+ GI+W+ WD L L K++GG+G + L  FNL+ML KQGW++L++ + L T ILKA+Y
Sbjct: 362 KNGRRGINWMRWDFLTLHKSLGGLGFRNLEAFNLSMLGKQGWKLLSDSSSLFTRILKAKY 421

Query: 133 FPSSDFLSAQLGQNPSFVWRSIVSS*EALKAGCRVKIGNG 14
           FP  DFL A LG NPS+ WRS+ S+   L  G R KIG+G
Sbjct: 422 FPRRDFLDATLGHNPSYTWRSLWSTQSLLTLGHRWKIGDG 461


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  202 bits (515), Expect = 3e-50
 Identities = 99/212 (46%), Positives = 138/212 (65%)
 Frame = -1

Query: 649 KSNVIFSTNTRAEDRVLVCESLGVSEVLKPGNYLGMPMHVGRNKGEVFGFLTDRIRQKLQ 470
           KS + FS NT    +  +C  L V E   PG YLGMP  VG+NK ++F F+  ++  ++Q
Sbjct: 186 KSALTFSRNTDDVVKRGICSILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQ 245

Query: 469 GWMTKKLSKAGRVTLLKSAAQSIPNFWMSLFSIPKDVIVAIERLMNGFYWGRGVNGKGIS 290
            W  ++LS+AG+   LK+ AQSIP + M L  +PKD+   IE +MNGF+W      + I 
Sbjct: 246 NWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNGFFWDSNPQCRSIR 305

Query: 289 WLAWDKLCLPKAVGGMGVKKLHKFNLAMLAKQGWRILNNENPLVTAILKARYFPSSDFLS 110
           W++W K+C  K  GG+G +KL  FNLA+LAKQGWR L N + LVT I +ARYF +S FL+
Sbjct: 306 WMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLN 365

Query: 109 AQLGQNPSFVWRSIVSS*EALKAGCRVKIGNG 14
           A+LG NPS++WRSI+++   LK GC   I +G
Sbjct: 366 AELGSNPSYMWRSILAAQGLLKRGCYWSIASG 397


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  195 bits (495), Expect = 7e-48
 Identities = 96/212 (45%), Positives = 136/212 (64%)
 Frame = -1

Query: 649  KSNVIFSTNTRAEDRVLVCESLGVSEVLKPGNYLGMPMHVGRNKGEVFGFLTDRIRQKLQ 470
            K  + FS NT    +  +C  L V E   PG YLGMP  VG+NK ++F F+  ++  ++Q
Sbjct: 1273 KXALTFSRNTDDVVKRGICSILQVEEQADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQ 1332

Query: 469  GWMTKKLSKAGRVTLLKSAAQSIPNFWMSLFSIPKDVIVAIERLMNGFYWGRGVNGKGIS 290
             W  ++LS+AG+   LK+ AQSIP + M L  +PKD+   IE +MN F+W      + I 
Sbjct: 1333 NWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNXFFWDSNPQXRSIR 1392

Query: 289  WLAWDKLCLPKAVGGMGVKKLHKFNLAMLAKQGWRILNNENPLVTAILKARYFPSSDFLS 110
            W++W K+C  K  GG+G +KL  FNLA+LAKQG R L N + LVT I +ARYF +S FL+
Sbjct: 1393 WMSWXKMCKQKKDGGLGFRKLEDFNLALLAKQGXRFLQNLDSLVTIIFQARYFRNSSFLN 1452

Query: 109  AQLGQNPSFVWRSIVSS*EALKAGCRVKIGNG 14
            A+LG NPS++WRSI+++ + LK GC   I +G
Sbjct: 1453 AELGSNPSYMWRSILAAQDLLKMGCYWSIASG 1484


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  193 bits (491), Expect = 2e-47
 Identities = 92/197 (46%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
 Frame = -1

Query: 646 SNVIFSTNTRAEDRVLVCESLGVSEVLKPGNYLGMPMHVGRNKGEVFGFLTDRIRQKLQG 467
           + + FS N  + DR  +   LGVS  L  G YLG+   +G++K  VFGFL DR+ ++LQG
Sbjct: 120 NGIFFSKNASSLDRDFISNILGVSTPLNTGRYLGLLSLIGKSKRVVFGFLRDRLWRRLQG 179

Query: 466 WMTKKLSKAGRVTLLKSAAQSIPNFWMSLFSIPKDVIVAIERLMNGFYWG-RGVNGKGIS 290
           W +K LS+AG+  L+K   Q+IP++ MS F +P  +   ++++MN F+WG +   G+ I+
Sbjct: 180 WQSKLLSQAGKKILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKSDGGRRIN 239

Query: 289 WLAWDKLCLPKAVGGMGVKKLHKFNLAMLAKQGWRILNNENPLVTAILKARYFPSSDFLS 110
           WL+WDKLCL K  GG+G + L  FNLAML KQGW ++   + L+  +LKARY+ S DFLS
Sbjct: 240 WLSWDKLCLRKEEGGLGFRNLRDFNLAMLGKQGWNLITKPDSLIARLLKARYYCSRDFLS 299

Query: 109 AQLGQNPSFVWRSIVSS 59
           A+L  NPSF W+ I SS
Sbjct: 300 ARLSHNPSFTWKGIWSS 316


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  190 bits (483), Expect = 2e-46
 Identities = 93/214 (43%), Positives = 134/214 (62%)
 Frame = -1

Query: 652  AKSNVIFSTNTRAEDRVLVCESLGVSEVLKPGNYLGMPMHVGRNKGEVFGFLTDRIRQKL 473
            +K+ V+FS +   E R  +   LGV EV +   YLG+P  +GR+K   F  + +RI +KL
Sbjct: 720  SKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKL 779

Query: 472  QGWMTKKLSKAGRVTLLKSAAQSIPNFWMSLFSIPKDVIVAIERLMNGFYWGRGVNGKGI 293
            QGW  K LS+ G+  L+KS AQ+IP + MS+FS+P  +I  I  L+  F+WG     + +
Sbjct: 780  QGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTNRKM 839

Query: 292  SWLAWDKLCLPKAVGGMGVKKLHKFNLAMLAKQGWRILNNENPLVTAILKARYFPSSDFL 113
             W +WD LC PK++GG+G + LH FN ++LAKQ WR+   +  L+  +L+ARYF SS+ L
Sbjct: 840  HWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSELL 899

Query: 112  SAQLGQNPSFVWRSIVSS*EALKAGCRVKIGNGE 11
             A+ G NPSF WRSI  S   L  G +  +G+GE
Sbjct: 900  EARRGYNPSFTWRSIWGSKSLLLEGLKWCVGSGE 933


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