BLASTX nr result

ID: Cnidium21_contig00036837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036837
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26465.3| unnamed protein product [Vitis vinifera]              229   3e-58
emb|CAN71104.1| hypothetical protein VITISV_000039 [Vitis vinifera]   229   3e-58
ref|XP_002319778.1| predicted protein [Populus trichocarpa] gi|2...   214   8e-54
ref|XP_002520087.1| origin recognition complex subunit, putative...   207   1e-51
ref|XP_004143732.1| PREDICTED: origin recognition complex subuni...   192   4e-47

>emb|CBI26465.3| unnamed protein product [Vitis vinifera]
          Length = 4326

 Score =  229 bits (583), Expect = 3e-58
 Identities = 127/194 (65%), Positives = 143/194 (73%), Gaps = 7/194 (3%)
 Frame = -1

Query: 562 RKSAG--KARRRIDLSASVHDNSEKS--GTGEADG---LEKLRNEAFDCVWSKTESVIKD 404
           RKS+G  K RRRI+LS     N+EK   GTGE       E LR EAF+ VWSK ES IKD
Sbjct: 27  RKSSGSRKIRRRIELSPISAKNAEKMEIGTGEERDDHHYEHLRMEAFNFVWSKIESTIKD 86

Query: 403 VLRNINLDVFNEIDRWVHESFDAITSRGKPEFAKVTCSFPIVTDATSKQLFCGLVLTRNM 224
           VLRNINL+VFNEI RWV ESFDAI S G     K T S+PIVTDAT +QLF GLV T+NM
Sbjct: 87  VLRNINLNVFNEIHRWVCESFDAIKSCGTT-LTKATHSYPIVTDATFRQLFTGLVFTKNM 145

Query: 223 EVVDDLLTFADLGQHLRSHGCHVANLSSCDFSPKNGISGSIKSLLRKFLMVTLDVADISA 44
           E VDDL+TF +LG HL+SHGCHVANLSS DFS  NGI G ++SLLR+FLMVTLD ADIS 
Sbjct: 146 EFVDDLMTFEELGLHLKSHGCHVANLSSIDFSANNGIGGCLRSLLRQFLMVTLDAADISI 205

Query: 43  LASWYAEHDNYGNP 2
           LASWY++  NY  P
Sbjct: 206 LASWYSDQGNYNKP 219


>emb|CAN71104.1| hypothetical protein VITISV_000039 [Vitis vinifera]
          Length = 244

 Score =  229 bits (583), Expect = 3e-58
 Identities = 127/194 (65%), Positives = 143/194 (73%), Gaps = 7/194 (3%)
 Frame = -1

Query: 562 RKSAG--KARRRIDLSASVHDNSEKS--GTGEADG---LEKLRNEAFDCVWSKTESVIKD 404
           RKS+G  K RRRI+LS     N+EK   GTGE       E LR EAF+ VWSK ES IKD
Sbjct: 27  RKSSGSRKIRRRIELSPISAKNAEKMEIGTGEERDDHHYEHLRMEAFNFVWSKIESTIKD 86

Query: 403 VLRNINLDVFNEIDRWVHESFDAITSRGKPEFAKVTCSFPIVTDATSKQLFCGLVLTRNM 224
           VLRNINL+VFNEI RWV ESFDAI S G     K T S+PIVTDAT +QLF GLV T+NM
Sbjct: 87  VLRNINLNVFNEIHRWVCESFDAIKSCGTT-LTKATHSYPIVTDATFRQLFTGLVFTKNM 145

Query: 223 EVVDDLLTFADLGQHLRSHGCHVANLSSCDFSPKNGISGSIKSLLRKFLMVTLDVADISA 44
           E VDDL+TF +LG HL+SHGCHVANLSS DFS  NGI G ++SLLR+FLMVTLD ADIS 
Sbjct: 146 EFVDDLMTFEELGLHLKSHGCHVANLSSIDFSANNGIGGCLRSLLRQFLMVTLDAADISI 205

Query: 43  LASWYAEHDNYGNP 2
           LASWY++  NY  P
Sbjct: 206 LASWYSDQGNYNKP 219


>ref|XP_002319778.1| predicted protein [Populus trichocarpa] gi|222858154|gb|EEE95701.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  214 bits (545), Expect = 8e-54
 Identities = 111/187 (59%), Positives = 135/187 (72%), Gaps = 5/187 (2%)
 Frame = -1

Query: 547 KARRRIDLSASVHDNSEKSGTGEADGLE-----KLRNEAFDCVWSKTESVIKDVLRNINL 383
           K RRRIDLS S+  N E     +A+  +      +R EAFD VWSK +S IKDVLR++N 
Sbjct: 24  KTRRRIDLSPSLPKNGENLDAEKAEAWDDCRHVSIRMEAFDDVWSKIKSTIKDVLRDVNT 83

Query: 382 DVFNEIDRWVHESFDAITSRGKPEFAKVTCSFPIVTDATSKQLFCGLVLTRNMEVVDDLL 203
           +VFNEI  WV ESF+ ITS   P F + T SFP+VTDA SKQLF GLVLT+NME VDDLL
Sbjct: 84  NVFNEIHHWVRESFNMITSFAIPTFPEATGSFPMVTDAASKQLFTGLVLTKNMEFVDDLL 143

Query: 202 TFADLGQHLRSHGCHVANLSSCDFSPKNGISGSIKSLLRKFLMVTLDVADISALASWYAE 23
           TF +LG +L+S GCHVANLSS +FS KNGI G ++SLLR+FLMVT+DV D+S LA+WY E
Sbjct: 144 TFEELGSYLKSQGCHVANLSSLEFSVKNGIGGCLRSLLRQFLMVTVDVTDVSILATWYRE 203

Query: 22  HDNYGNP 2
             +   P
Sbjct: 204 QGSCNYP 210


>ref|XP_002520087.1| origin recognition complex subunit, putative [Ricinus communis]
           gi|223540851|gb|EEF42411.1| origin recognition complex
           subunit, putative [Ricinus communis]
          Length = 715

 Score =  207 bits (526), Expect = 1e-51
 Identities = 108/184 (58%), Positives = 134/184 (72%), Gaps = 2/184 (1%)
 Frame = -1

Query: 547 KARRRIDLSASVHDNSEKSGTGEADGLEKL--RNEAFDCVWSKTESVIKDVLRNINLDVF 374
           K RRRIDLS S +  +EK   GE+D  E +  R EAF+ +WSK ES IKDVLR++N  VF
Sbjct: 50  KTRRRIDLSPSKNKETEKP-EGESDDHEFVHQRMEAFELIWSKIESTIKDVLRDLNTSVF 108

Query: 373 NEIDRWVHESFDAITSRGKPEFAKVTCSFPIVTDATSKQLFCGLVLTRNMEVVDDLLTFA 194
           +EI RW+ ESF++I S G+P F + T SFP   D TSK+LF GLVLT+N+E  DDLLTF 
Sbjct: 109 DEIYRWIRESFNSIKSCGEPSFLEATQSFPAAKDVTSKKLFTGLVLTKNLEFADDLLTFK 168

Query: 193 DLGQHLRSHGCHVANLSSCDFSPKNGISGSIKSLLRKFLMVTLDVADISALASWYAEHDN 14
           +LG HL+S GC+VANLSS DFS KNGI G ++SLLR+ +MVTLD  DIS LA+WY E  +
Sbjct: 169 ELGLHLKSQGCYVANLSSLDFSVKNGIGGCLRSLLRQLVMVTLDAPDISILATWYREQGD 228

Query: 13  YGNP 2
             NP
Sbjct: 229 CTNP 232


>ref|XP_004143732.1| PREDICTED: origin recognition complex subunit 3-like [Cucumis
           sativus]
          Length = 737

 Score =  192 bits (487), Expect = 4e-47
 Identities = 106/191 (55%), Positives = 127/191 (66%), Gaps = 4/191 (2%)
 Frame = -1

Query: 562 RKS--AGKARRRIDLSASVHDNSEKSGTGEADG--LEKLRNEAFDCVWSKTESVIKDVLR 395
           RKS   GK+R+R  LS S  +  E     E DG  LE LR E  + VWSK E+ IKDVLR
Sbjct: 40  RKSNLCGKSRKRTKLSPSGPNGIENLDNEEPDGSQLEHLRMECLELVWSKLETTIKDVLR 99

Query: 394 NINLDVFNEIDRWVHESFDAITSRGKPEFAKVTCSFPIVTDATSKQLFCGLVLTRNMEVV 215
           + N+ VF++I RWV+ESF AI S G P  +  T  FP  T A  K LF GLVLT+NMEVV
Sbjct: 100 DTNVQVFDDISRWVYESFAAIRSSGTPSSSSATRPFPTFTRAECKVLFTGLVLTKNMEVV 159

Query: 214 DDLLTFADLGQHLRSHGCHVANLSSCDFSPKNGISGSIKSLLRKFLMVTLDVADISALAS 35
           DDLLTF +LG HL+SHGCHVA+LSS + S K+ I G I+SLLR+ L VT+D AD+  LAS
Sbjct: 160 DDLLTFEELGFHLKSHGCHVASLSSQELSAKSSIGGCIRSLLRQLLKVTVDAADMFILAS 219

Query: 34  WYAEHDNYGNP 2
           WY E   Y  P
Sbjct: 220 WYREQGYYEKP 230


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