BLASTX nr result

ID: Cnidium21_contig00036792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036792
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA21135.1| RNase NE [Nicotiana alata]                             179   2e-43
ref|NP_563941.1| ribonuclease T2 [Arabidopsis thaliana] gi|50807...   179   2e-43
dbj|BAC77613.1| ribonuclease NW [Nicotiana glutinosa]                 178   4e-43
pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa...   178   5e-43
ref|XP_002892796.1| ribonuclease T2 family protein [Arabidopsis ...   177   6e-43

>gb|AAA21135.1| RNase NE [Nicotiana alata]
          Length = 231

 Score =  179 bits (455), Expect = 2e-43
 Identities = 79/138 (57%), Positives = 105/138 (76%)
 Frame = -1

Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244
           DLISRMQ++WP+L+CPS  G + WS EW++HGTCSES+ DQH YFK AL+LK+++ LL+ 
Sbjct: 94  DLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCSESIFDQHGYFKKALDLKNQINLLEI 153

Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64
           L+ AGI PDG  YS++SI  AIR+ IGY+PG++CN D SG  QL+Q+YICVD   +  IE
Sbjct: 154 LQGAGINPDGGFYSLNSIKNAIRSAIGYTPGIECNVDDSGNSQLYQVYICVDGSGSNLIE 213

Query: 63  CPGLPNFRCTSNIKFAAF 10
           CP  P  +C S+I+F  F
Sbjct: 214 CPVFPRGKCGSSIEFPTF 231


>ref|NP_563941.1| ribonuclease T2 [Arabidopsis thaliana]
           gi|5080798|gb|AAD39308.1|AC007576_31 Very similar to
           ribonucleases [Arabidopsis thaliana]
           gi|332191003|gb|AEE29124.1| ribonuclease T2 [Arabidopsis
           thaliana]
          Length = 228

 Score =  179 bits (455), Expect = 2e-43
 Identities = 79/138 (57%), Positives = 101/138 (73%)
 Frame = -1

Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244
           DL+S ++K+WP+LSCPSN G + W  EW++HGTCSESV+DQH YF++AL LK K  LLQ 
Sbjct: 91  DLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFENALKLKQKANLLQI 150

Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64
           L+N+GI PD   Y++D I  AI+  IG++PG++CN D     QLHQIYICVDT  T FIE
Sbjct: 151 LKNSGINPDDGFYNLDKITNAIKDGIGFTPGIECNKDPERNAQLHQIYICVDTSGTEFIE 210

Query: 63  CPGLPNFRCTSNIKFAAF 10
           CP LP   C S I+F+ F
Sbjct: 211 CPVLPRGSCPSQIQFSKF 228


>dbj|BAC77613.1| ribonuclease NW [Nicotiana glutinosa]
          Length = 229

 Score =  178 bits (452), Expect = 4e-43
 Identities = 79/138 (57%), Positives = 106/138 (76%)
 Frame = -1

Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244
           DLISRMQ++WP+L+CPS  G + WS EW++HGTC+E+V DQH YFK AL+LK+++ LL+ 
Sbjct: 92  DLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEI 151

Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64
           L+ AGI PDG  YS++SI  AIR+ IGY+PG++CN D+SG  QL+QIYICVD   +  IE
Sbjct: 152 LQGAGINPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDGSGSNLIE 211

Query: 63  CPGLPNFRCTSNIKFAAF 10
           CP  P  +C S+I+F  F
Sbjct: 212 CPIFPRGKCGSSIEFPTF 229


>pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa Ribonuclease
           Nw gi|34810727|pdb|1IYB|B Chain B, Crystal Structure Of
           The Nicotiana Glutinosa Ribonuclease Nw
          Length = 208

 Score =  178 bits (451), Expect = 5e-43
 Identities = 79/138 (57%), Positives = 106/138 (76%)
 Frame = -1

Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244
           DLISRMQ++WP+L+CPS  G + WS EW++HGTC+E+V DQH YFK AL+LK+++ LL+ 
Sbjct: 71  DLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEI 130

Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64
           L+ AGI PDG  YS++SI  AIR+ IGY+PG++CN D+SG  QL+QIYICVD   +  IE
Sbjct: 131 LQGAGIHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDGSGSNLIE 190

Query: 63  CPGLPNFRCTSNIKFAAF 10
           CP  P  +C S+I+F  F
Sbjct: 191 CPIFPRGKCGSSIEFPTF 208


>ref|XP_002892796.1| ribonuclease T2 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338638|gb|EFH69055.1| ribonuclease T2 family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 226

 Score =  177 bits (450), Expect = 6e-43
 Identities = 79/138 (57%), Positives = 100/138 (72%)
 Frame = -1

Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244
           DL+S ++K+WP+LSCPSN G   W  EW++HGTCSESV+DQH YF++AL LK+K  LLQ 
Sbjct: 89  DLVSSLKKNWPTLSCPSNEGFKFWEHEWEKHGTCSESVMDQHDYFENALKLKEKANLLQI 148

Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64
           L N+GI PD   YS+  I  AI+  IG++PG++CN D     QLHQIYICVDT  T FIE
Sbjct: 149 LTNSGINPDDGFYSLTKITNAIKNGIGFTPGIECNKDPERNDQLHQIYICVDTSGTEFIE 208

Query: 63  CPGLPNFRCTSNIKFAAF 10
           CP LP  RC S ++F+ F
Sbjct: 209 CPVLPRGRCPSQLQFSKF 226


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