BLASTX nr result
ID: Cnidium21_contig00036792
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00036792 (426 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAA21135.1| RNase NE [Nicotiana alata] 179 2e-43 ref|NP_563941.1| ribonuclease T2 [Arabidopsis thaliana] gi|50807... 179 2e-43 dbj|BAC77613.1| ribonuclease NW [Nicotiana glutinosa] 178 4e-43 pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa... 178 5e-43 ref|XP_002892796.1| ribonuclease T2 family protein [Arabidopsis ... 177 6e-43 >gb|AAA21135.1| RNase NE [Nicotiana alata] Length = 231 Score = 179 bits (455), Expect = 2e-43 Identities = 79/138 (57%), Positives = 105/138 (76%) Frame = -1 Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244 DLISRMQ++WP+L+CPS G + WS EW++HGTCSES+ DQH YFK AL+LK+++ LL+ Sbjct: 94 DLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCSESIFDQHGYFKKALDLKNQINLLEI 153 Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64 L+ AGI PDG YS++SI AIR+ IGY+PG++CN D SG QL+Q+YICVD + IE Sbjct: 154 LQGAGINPDGGFYSLNSIKNAIRSAIGYTPGIECNVDDSGNSQLYQVYICVDGSGSNLIE 213 Query: 63 CPGLPNFRCTSNIKFAAF 10 CP P +C S+I+F F Sbjct: 214 CPVFPRGKCGSSIEFPTF 231 >ref|NP_563941.1| ribonuclease T2 [Arabidopsis thaliana] gi|5080798|gb|AAD39308.1|AC007576_31 Very similar to ribonucleases [Arabidopsis thaliana] gi|332191003|gb|AEE29124.1| ribonuclease T2 [Arabidopsis thaliana] Length = 228 Score = 179 bits (455), Expect = 2e-43 Identities = 79/138 (57%), Positives = 101/138 (73%) Frame = -1 Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244 DL+S ++K+WP+LSCPSN G + W EW++HGTCSESV+DQH YF++AL LK K LLQ Sbjct: 91 DLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFENALKLKQKANLLQI 150 Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64 L+N+GI PD Y++D I AI+ IG++PG++CN D QLHQIYICVDT T FIE Sbjct: 151 LKNSGINPDDGFYNLDKITNAIKDGIGFTPGIECNKDPERNAQLHQIYICVDTSGTEFIE 210 Query: 63 CPGLPNFRCTSNIKFAAF 10 CP LP C S I+F+ F Sbjct: 211 CPVLPRGSCPSQIQFSKF 228 >dbj|BAC77613.1| ribonuclease NW [Nicotiana glutinosa] Length = 229 Score = 178 bits (452), Expect = 4e-43 Identities = 79/138 (57%), Positives = 106/138 (76%) Frame = -1 Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244 DLISRMQ++WP+L+CPS G + WS EW++HGTC+E+V DQH YFK AL+LK+++ LL+ Sbjct: 92 DLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEI 151 Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64 L+ AGI PDG YS++SI AIR+ IGY+PG++CN D+SG QL+QIYICVD + IE Sbjct: 152 LQGAGINPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDGSGSNLIE 211 Query: 63 CPGLPNFRCTSNIKFAAF 10 CP P +C S+I+F F Sbjct: 212 CPIFPRGKCGSSIEFPTF 229 >pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa Ribonuclease Nw gi|34810727|pdb|1IYB|B Chain B, Crystal Structure Of The Nicotiana Glutinosa Ribonuclease Nw Length = 208 Score = 178 bits (451), Expect = 5e-43 Identities = 79/138 (57%), Positives = 106/138 (76%) Frame = -1 Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244 DLISRMQ++WP+L+CPS G + WS EW++HGTC+E+V DQH YFK AL+LK+++ LL+ Sbjct: 71 DLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEI 130 Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64 L+ AGI PDG YS++SI AIR+ IGY+PG++CN D+SG QL+QIYICVD + IE Sbjct: 131 LQGAGIHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDGSGSNLIE 190 Query: 63 CPGLPNFRCTSNIKFAAF 10 CP P +C S+I+F F Sbjct: 191 CPIFPRGKCGSSIEFPTF 208 >ref|XP_002892796.1| ribonuclease T2 family protein [Arabidopsis lyrata subsp. lyrata] gi|297338638|gb|EFH69055.1| ribonuclease T2 family protein [Arabidopsis lyrata subsp. lyrata] Length = 226 Score = 177 bits (450), Expect = 6e-43 Identities = 79/138 (57%), Positives = 100/138 (72%) Frame = -1 Query: 423 DLISRMQKSWPSLSCPSNNGLSQWSREWKQHGTCSESVLDQHSYFKSALNLKDKVKLLQK 244 DL+S ++K+WP+LSCPSN G W EW++HGTCSESV+DQH YF++AL LK+K LLQ Sbjct: 89 DLVSSLKKNWPTLSCPSNEGFKFWEHEWEKHGTCSESVMDQHDYFENALKLKEKANLLQI 148 Query: 243 LRNAGIKPDGKLYSIDSIMEAIRAEIGYSPGVKCNSDKSGKLQLHQIYICVDTLVTRFIE 64 L N+GI PD YS+ I AI+ IG++PG++CN D QLHQIYICVDT T FIE Sbjct: 149 LTNSGINPDDGFYSLTKITNAIKNGIGFTPGIECNKDPERNDQLHQIYICVDTSGTEFIE 208 Query: 63 CPGLPNFRCTSNIKFAAF 10 CP LP RC S ++F+ F Sbjct: 209 CPVLPRGRCPSQLQFSKF 226