BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036791
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   156   2e-36
dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...   155   3e-36
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   155   4e-36
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]   154   5e-36
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   153   1e-35

>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  156 bits (394), Expect = 2e-36
 Identities = 83/158 (52%), Positives = 111/158 (70%), Gaps = 3/158 (1%)
 Frame = -2

Query: 490  SFELPSRAA-TPLPQNLKLHADEGELITNPETY--MVGKLNFLTNKRPDLSYTVQVLIQF 320
            S  L SR A TPL QN  L +D+G L+++P+ Y  +VG+L +L + RP+LSY+V VL QF
Sbjct: 1247 SGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVGRLLYLLHTRPELSYSVHVLAQF 1306

Query: 319  MHSLRTSHIQALSHTLRYISQTIGQGILLQGSNNITLQAYSDSDRASCPDTRRSVTGYVL 140
            M + R +H  A    +RY+  + GQGILL    ++TL+ Y DSD  SCP TRRS++ YV+
Sbjct: 1307 MQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCDSDWQSCPLTRRSISAYVV 1366

Query: 139  LIGGSPVSWKSKKQAIVSKSSAESEYRAMASAA*EITW 26
            L+GGSP+SWK+KKQ  VS SSAE+EYRAM+ A  EI W
Sbjct: 1367 LLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKW 1404


>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score =  155 bits (392), Expect = 3e-36
 Identities = 79/160 (49%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
 Frame = -2

Query: 499 SDCSFELPSRAATPLPQNLKLHADEGELITNPETY--MVGKLNFLTNKRPDLSYTVQVLI 326
           S+ S   P    TPL  +LKL +  GEL+ +P  Y  +VGKLN+LT+ RPD+S+ VQ L 
Sbjct: 130 SEYSSLSPRTVTTPLDPSLKLSSISGELLQDPTFYRRLVGKLNYLTHTRPDISFAVQTLS 189

Query: 325 QFMHSLRTSHIQALSHTLRYISQTIGQGILLQGSNNITLQAYSDSDRASCPDTRRSVTGY 146
           Q M S R+ H++A  HTLRYI    G GI L    +  L  + D+D ASCPD+RRS++G+
Sbjct: 190 QHMQSPRSGHLEAAYHTLRYIRNNPGLGIFLSSEQSFQLTGFCDADWASCPDSRRSISGF 249

Query: 145 VLLIGGSPVSWKSKKQAIVSKSSAESEYRAMASAA*EITW 26
            L +GG P+SWKSKKQ +VS SSAE+EYR++     EI W
Sbjct: 250 FLTMGGCPLSWKSKKQQVVSLSSAEAEYRSLRRLVAEIAW 289


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  155 bits (391), Expect = 4e-36
 Identities = 78/150 (52%), Positives = 109/150 (72%), Gaps = 2/150 (1%)
 Frame = -2

Query: 469  AATPLPQNLKLHADEGELITNPETY--MVGKLNFLTNKRPDLSYTVQVLIQFMHSLRTSH 296
            A TPL QN  L +D+G L+ +P+ +  +VG+L +L + RP+LSY+V VL QFM + R +H
Sbjct: 1245 AYTPLEQNHHLASDDGPLLQDPKPFRRLVGRLLYLLHTRPELSYSVHVLSQFMQAPREAH 1304

Query: 295  IQALSHTLRYISQTIGQGILLQGSNNITLQAYSDSDRASCPDTRRSVTGYVLLIGGSPVS 116
            ++A    +RY+  + GQGILL  + ++TL+ Y DSD  SCP TRRS++ YV+L+GGSP+S
Sbjct: 1305 LEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLGGSPIS 1364

Query: 115  WKSKKQAIVSKSSAESEYRAMASAA*EITW 26
            WK+KKQ  VS SSAE+EYRAM+ A  EI W
Sbjct: 1365 WKTKKQDTVSHSSAEAEYRAMSVALKEIKW 1394


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score =  154 bits (390), Expect = 5e-36
 Identities = 75/150 (50%), Positives = 109/150 (72%), Gaps = 2/150 (1%)
 Frame = -2

Query: 469  AATPLPQNLKLHADEGELITNPETY--MVGKLNFLTNKRPDLSYTVQVLIQFMHSLRTSH 296
            A TP+  N++L  D+GEL+T+P  Y  ++GKL +LT  RP+L+Y++  LIQF+   R  H
Sbjct: 766  AKTPMQLNMQLSQDDGELLTDPNMYRRLIGKLIYLTITRPNLTYSMNKLIQFLSQPRRPH 825

Query: 295  IQALSHTLRYISQTIGQGILLQGSNNITLQAYSDSDRASCPDTRRSVTGYVLLIGGSPVS 116
            +QA+   L+YI  + G+GI    S+++ L+A+SDSD A+CPD+R+SVTG+ + +G S +S
Sbjct: 826  LQAVYRILQYIKGSPGKGIFFSASSSLQLKAFSDSDWAACPDSRKSVTGFCIFLGDSLIS 885

Query: 115  WKSKKQAIVSKSSAESEYRAMASAA*EITW 26
            WKSKKQ  VS+SSAE+EYRAMA    E+TW
Sbjct: 886  WKSKKQRTVSRSSAEAEYRAMAHVTCELTW 915


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/150 (50%), Positives = 108/150 (72%), Gaps = 2/150 (1%)
 Frame = -2

Query: 460  PLPQNLKLHADEGELITNPETY--MVGKLNFLTNKRPDLSYTVQVLIQFMHSLRTSHIQA 287
            P+ QN +L    GEL++NPE+Y  +VG+L +L   RPDL+Y+V +L QFMH  R  H +A
Sbjct: 856  PIEQNHRLGLANGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQFMHEPRIEHWEA 915

Query: 286  LSHTLRYISQTIGQGILLQGSNNITLQAYSDSDRASCPDTRRSVTGYVLLIGGSPVSWKS 107
                +RY+  T GQGILL+  ++++LQ + DSD A+CP TRRS++G+++ +G SP+SWK+
Sbjct: 916  ALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTRRSLSGWLVFLGQSPISWKT 975

Query: 106  KKQAIVSKSSAESEYRAMASAA*EITWT*G 17
            KKQ  VS+SSAE+EYRAMA+   E+ W  G
Sbjct: 976  KKQHTVSRSSAEAEYRAMAAVTCELKWLKG 1005