BLASTX nr result
ID: Cnidium21_contig00036788
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00036788 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy... 101 7e-20 emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera] 97 2e-18 gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 96 4e-18 gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi... 95 7e-18 emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera] 94 1e-17 >dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida] Length = 463 Score = 101 bits (251), Expect = 7e-20 Identities = 44/92 (47%), Positives = 63/92 (68%) Frame = -2 Query: 283 LIDINHPYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASG 104 ++DINHPYYL+SSD PGM+L + +Y W R + I+LS+K KLGF+ G++ KP Sbjct: 30 VLDINHPYYLASSDAPGMNLINTSFDGSSYGNWKRGVLISLSAKNKLGFITGAYKKPDKE 89 Query: 103 SSLLSHWNRCNHMVISWLLNSVSADIRNSIVY 8 L W RC+ MV++WLLNS+S +I S++Y Sbjct: 90 DLLFEQWRRCSDMVLAWLLNSLSKEIAESVLY 121 >emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera] Length = 334 Score = 96.7 bits (239), Expect = 2e-18 Identities = 46/88 (52%), Positives = 59/88 (67%) Frame = -2 Query: 265 PYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASGSSLLSH 86 P+ L SD+PGM L + VL NYS WSR+M I+LS+K K+GFV GS P+S Sbjct: 20 PFSLHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPS 79 Query: 85 WNRCNHMVISWLLNSVSADIRNSIVYMD 2 W RCN MVISWLLNS+ DI +S++Y + Sbjct: 80 WQRCNDMVISWLLNSIHPDIASSVIYAE 107 >gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana] Length = 1413 Score = 95.5 bits (236), Expect = 4e-18 Identities = 42/91 (46%), Positives = 66/91 (72%) Frame = -2 Query: 274 INHPYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASGSSL 95 ++ P +L ++D+PG+S+ ++ L+ NY+QWS +M+IAL +K K+ F+DGS +P G+ L Sbjct: 50 VHSPLFLHNADHPGISIVSVQLDGANYNQWSSAMKIALDAKNKIAFIDGSCPRPEEGNHL 109 Query: 94 LSHWNRCNHMVISWLLNSVSADIRNSIVYMD 2 L W+RCN MV SW+LNSV+ +I SI+ D Sbjct: 110 LRIWSRCNSMVKSWILNSVNREIYGSILSFD 140 >gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana] gi|17065314|gb|AAL32811.1| putative retroelement pol polyprotein [Arabidopsis thaliana] gi|21387147|gb|AAM47977.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 411 Score = 94.7 bits (234), Expect = 7e-18 Identities = 44/92 (47%), Positives = 65/92 (70%) Frame = -2 Query: 277 DINHPYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASGSS 98 ++++P L SSD+PG+S+ VL+ NY+ WS +M I+L +K KLGFVDGS L+P+ S Sbjct: 62 NVDNPLILHSSDHPGLSIVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDS 121 Query: 97 LLSHWNRCNHMVISWLLNSVSADIRNSIVYMD 2 W+RCN MV SW+LN V+ +I +SI+Y + Sbjct: 122 TFRIWSRCNSMVKSWILNVVNKEIYDSILYYE 153 >emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera] Length = 225 Score = 94.0 bits (232), Expect = 1e-17 Identities = 41/93 (44%), Positives = 64/93 (68%), Gaps = 2/93 (2%) Frame = -2 Query: 280 IDINHPYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASGS 101 +D +PY+L SD+PGM L + LN NYS W R+M I+L++K KLGF+DG+ P++ Sbjct: 21 LDAANPYFLHHSDHPGMVLVSKPLNGENYSTWCRAMTISLNAKSKLGFIDGTTTMPSATD 80 Query: 100 SLLSH--WNRCNHMVISWLLNSVSADIRNSIVY 8 H W +CN M++SW+LNS+S D+ +S+++ Sbjct: 81 KPDEHASWKKCNDMILSWILNSLSQDLADSVIF 113