BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036788
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   101   7e-20
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]    97   2e-18
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    96   4e-18
gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi...    95   7e-18
emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera]    94   1e-17

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  101 bits (251), Expect = 7e-20
 Identities = 44/92 (47%), Positives = 63/92 (68%)
 Frame = -2

Query: 283 LIDINHPYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASG 104
           ++DINHPYYL+SSD PGM+L     +  +Y  W R + I+LS+K KLGF+ G++ KP   
Sbjct: 30  VLDINHPYYLASSDAPGMNLINTSFDGSSYGNWKRGVLISLSAKNKLGFITGAYKKPDKE 89

Query: 103 SSLLSHWNRCNHMVISWLLNSVSADIRNSIVY 8
             L   W RC+ MV++WLLNS+S +I  S++Y
Sbjct: 90  DLLFEQWRRCSDMVLAWLLNSLSKEIAESVLY 121


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/88 (52%), Positives = 59/88 (67%)
 Frame = -2

Query: 265 PYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASGSSLLSH 86
           P+ L  SD+PGM L + VL   NYS WSR+M I+LS+K K+GFV GS   P+S       
Sbjct: 20  PFSLHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPS 79

Query: 85  WNRCNHMVISWLLNSVSADIRNSIVYMD 2
           W RCN MVISWLLNS+  DI +S++Y +
Sbjct: 80  WQRCNDMVISWLLNSIHPDIASSVIYAE 107


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/91 (46%), Positives = 66/91 (72%)
 Frame = -2

Query: 274 INHPYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASGSSL 95
           ++ P +L ++D+PG+S+ ++ L+  NY+QWS +M+IAL +K K+ F+DGS  +P  G+ L
Sbjct: 50  VHSPLFLHNADHPGISIVSVQLDGANYNQWSSAMKIALDAKNKIAFIDGSCPRPEEGNHL 109

Query: 94  LSHWNRCNHMVISWLLNSVSADIRNSIVYMD 2
           L  W+RCN MV SW+LNSV+ +I  SI+  D
Sbjct: 110 LRIWSRCNSMVKSWILNSVNREIYGSILSFD 140


>gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
           gi|17065314|gb|AAL32811.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|21387147|gb|AAM47977.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 411

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/92 (47%), Positives = 65/92 (70%)
 Frame = -2

Query: 277 DINHPYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASGSS 98
           ++++P  L SSD+PG+S+   VL+  NY+ WS +M I+L +K KLGFVDGS L+P+   S
Sbjct: 62  NVDNPLILHSSDHPGLSIVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDS 121

Query: 97  LLSHWNRCNHMVISWLLNSVSADIRNSIVYMD 2
               W+RCN MV SW+LN V+ +I +SI+Y +
Sbjct: 122 TFRIWSRCNSMVKSWILNVVNKEIYDSILYYE 153


>emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera]
          Length = 225

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/93 (44%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = -2

Query: 280 IDINHPYYLSSSDNPGMSLTTIVLNEHNYSQWSRSMEIALSSKMKLGFVDGSHLKPASGS 101
           +D  +PY+L  SD+PGM L +  LN  NYS W R+M I+L++K KLGF+DG+   P++  
Sbjct: 21  LDAANPYFLHHSDHPGMVLVSKPLNGENYSTWCRAMTISLNAKSKLGFIDGTTTMPSATD 80

Query: 100 SLLSH--WNRCNHMVISWLLNSVSADIRNSIVY 8
               H  W +CN M++SW+LNS+S D+ +S+++
Sbjct: 81  KPDEHASWKKCNDMILSWILNSLSQDLADSVIF 113