BLASTX nr result

ID: Cnidium21_contig00036784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036784
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vi...    92   2e-16
ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus tric...    88   2e-15
ref|XP_002329209.1| tir-nbs-lrr resistance protein [Populus tric...    88   3e-15
ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus tric...    87   4e-15
ref|XP_002334150.1| predicted protein [Populus trichocarpa] gi|2...    87   4e-15

>ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1557

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 13/179 (7%)
 Frame = +1

Query: 10   SMPEVPVSW*YFQYLRAWSTKCREIPDSIRNLKNLEILTL----NWFS----VLENVGAT 165
            S PEV  +    + L    T    +P SI  LK L +L L    N  S    +   +G  
Sbjct: 999  SFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLLSLSNGISNGIGLR 1058

Query: 166  LPAVFALY-TLKNLNLKDCYLFH--IPDSIGCLVSLQHLNLSGNHFYSLPPSLSQLINVE 336
            LP+ F+ + +L NL++ DC L    IP+ I  L+SL+ L+LS N+F S+P  +S+L N++
Sbjct: 1059 LPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLK 1118

Query: 337  TLTLTECMYLKEIQELPPKLSDLYASYCTSI--ESLDVSKLDHLRFLYLSYCSSLVRLQ 507
             L L +C  L  I ELPP + D+ A  CTS+   S  VS L  L+FL+ + CS  V  Q
Sbjct: 1119 DLRLAQCQSLTGIPELPPSVRDIDAHNCTSLLPGSSSVSTLQGLQFLFYN-CSKPVEDQ 1176


>ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862373|gb|EEE99879.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1561

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
 Frame = +1

Query: 16   PEVPVSW*YFQYLRAWSTKCREIPDSIRNLKNLEILTLNWFSVLEN----VGATLPAVFA 183
            PEV       +YL    T+  ++P  I NLK L  L +     L +    V   LP    
Sbjct: 917  PEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNCQHLRDIECIVDLQLPERCK 976

Query: 184  LYTLKNLNLKDCYLFHIPDSIGCLVSLQHLNLSGNHFYSLPPSLSQLINVETLTLTECMY 363
            L  L+ LNL  C ++ +PDS+G + SL+ L+LSGN+F S+P S+++L  ++ L L  C  
Sbjct: 977  LDCLRKLNLDGCQIWEVPDSLGLVSSLEVLDLSGNNFRSIPISINKLFELQYLGLRNCRN 1036

Query: 364  LKEIQELPPKLSDLYASYCTSIESLDVS 447
            L+ + ELPP+LS L A  C S+ ++  S
Sbjct: 1037 LESLPELPPRLSKLDADNCWSLRTVSCS 1064


>ref|XP_002329209.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222870990|gb|EEF08121.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1470

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
 Frame = +1

Query: 16   PEVPVSW*YFQYLRAWSTKCREIPDSIRNLKNLEILTLNWFSVLENVGATLPAVFA---- 183
            PEV       +YL    T+  ++P  I NLK L  L +     L ++   +    +    
Sbjct: 893  PEVLEPMVCLRYLYLEETRITKLPSPIGNLKGLACLEVGNCKYLNDIECFVDLQLSERWV 952

Query: 184  -LYTLKNLNLKDCYLFHIPDSIGCLVSLQHLNLSGNHFYSLPPSLSQLINVETLTLTECM 360
             L  L+ LNL  C++  +PDS+GCL SL+ L+LSGN+F ++P S+++L  ++ L L  C 
Sbjct: 953  DLDYLRKLNLDGCHISVVPDSLGCLSSLEVLDLSGNNFSTIPLSINKLSELQYLGLRNCK 1012

Query: 361  YLKEIQELPPKLSDLYASYCTSI-----ESLDVSKLDHLRFLYLSYCSSLVRL 504
             L+ + ELPP+LS L A  C S+      S  V K +   F++ + C SL R+
Sbjct: 1013 RLESLPELPPRLSKLDADNCESLNYLGSSSSTVVKGNIFEFIFTN-CLSLCRI 1064


>ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1203

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 27/179 (15%)
 Frame = +1

Query: 67   TKCREIPDSIRNLKNLEILTLN------------WFSVL---------ENVGATLPAVFA 183
            T  RE P SI +LKNL+IL+ +            W  ++          +    LP++  
Sbjct: 818  TAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQRLMFPLMPGKRANSTSLVLPSLSG 877

Query: 184  LYTLKNLNLKDCYLFH--IPDSIGCLVSLQHLNLSGNHFYSLPPSLSQLINVETLTLTEC 357
            L +L  L L +C L    +P+ IG L SL+ LNLS N F SLP S+ QL  ++ L + +C
Sbjct: 878  LSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKFVSLPTSIDQLSGLQFLRMEDC 937

Query: 358  MYLKEIQELPPKLSDLYASYCTSIESLDVSK----LDHLRFLYLSYCSSLVRLQVWTNL 522
              L+ + ELP  L +   + CTS+E +  S+    L++LR+L+++ C  L     W N+
Sbjct: 938  KMLQSLPELPSNLEEFRVNGCTSLEKMQFSRKLCQLNYLRYLFIN-CWRLSESDCWNNM 995


>ref|XP_002334150.1| predicted protein [Populus trichocarpa] gi|222869839|gb|EEF06970.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 49/126 (38%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
 Frame = +1

Query: 67  TKCREIPDSIRNLKNLEILTLNWFSVLENVGATLPAVFALYTLKNLNLKDCYLFH--IPD 240
           T  R++P S+  LKNL++L+L+ F  L    A LP++  L +L+ L L+ C L    +P+
Sbjct: 52  TSIRQLPASLFLLKNLKVLSLDGFKRL----AVLPSLSGLCSLEVLGLRACNLREGALPE 107

Query: 241 SIGCLVSLQHLNLSGNHFYSLPPSLSQLINVETLTLTECMYLKEIQELPPKLSDLYASYC 420
            IGCL SL  L+LS N+F SLP S++ L  +E L L +C  L+ + E+P K+  +Y + C
Sbjct: 108 DIGCLSSLTSLDLSRNNFVSLPRSINMLYELEKLVLEDCTMLESLPEVPSKVQTVYLNGC 167

Query: 421 TSIESL 438
            S++++
Sbjct: 168 ISLKTI 173


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