BLASTX nr result

ID: Cnidium21_contig00036772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036772
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   194   5e-48
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   194   5e-48
emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]   191   5e-47
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   190   1e-46
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]   187   1e-45

>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
           thaliana]
          Length = 1334

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/131 (72%), Positives = 111/131 (84%)
 Frame = +2

Query: 2   KDLKAKNYLFQSIDKTILKTIIQKDTSKQLWDSMKRKYQGNARVQRAQLQTLRREFEILE 181
           KD K KNYLF SIDKTILKTI+QK+TSK LW+SMKRKYQGN RVQ AQLQ LRR FE+LE
Sbjct: 63  KDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLE 122

Query: 182 MKMGESVNEYFSKVMLVANDMRNAGESMPDVKIVEKILRTLTEKFNYIVCSIEESKDIDQ 361
           MK+GE++  YFS+VM + NDMRN GE MPD K+VEKILRTL EKF Y+VC+IEES +I +
Sbjct: 123 MKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKE 182

Query: 362 LSVDELQSSLL 394
           L+VD LQSSL+
Sbjct: 183 LTVDGLQSSLM 193


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
           gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1334

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/131 (72%), Positives = 111/131 (84%)
 Frame = +2

Query: 2   KDLKAKNYLFQSIDKTILKTIIQKDTSKQLWDSMKRKYQGNARVQRAQLQTLRREFEILE 181
           KD K KNYLF SIDKTILKTI+QK+TSK LW+SMKRKYQGN RVQ AQLQ LRR FE+LE
Sbjct: 63  KDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLE 122

Query: 182 MKMGESVNEYFSKVMLVANDMRNAGESMPDVKIVEKILRTLTEKFNYIVCSIEESKDIDQ 361
           MK+GE++  YFS+VM + NDMRN GE MPD K+VEKILRTL EKF Y+VC+IEES +I +
Sbjct: 123 MKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKE 182

Query: 362 LSVDELQSSLL 394
           L+VD LQSSL+
Sbjct: 183 LTVDGLQSSLM 193


>emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]
          Length = 1095

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/131 (70%), Positives = 114/131 (87%)
 Frame = +2

Query: 2   KDLKAKNYLFQSIDKTILKTIIQKDTSKQLWDSMKRKYQGNARVQRAQLQTLRREFEILE 181
           KDLK KNYLFQ+ID+TIL+TI+QK+TSKQ+WDSMK+KY+GNARV+R+ LQ LRR+FE LE
Sbjct: 4   KDLKVKNYLFQAIDRTILETILQKNTSKQIWDSMKKKYEGNARVKRSILQALRRDFETLE 63

Query: 182 MKMGESVNEYFSKVMLVANDMRNAGESMPDVKIVEKILRTLTEKFNYIVCSIEESKDIDQ 361
           MK GE + +YFS+VM V+N MR  GE M +V IVEKILR+LT+ FNYIVCSIEESKD D 
Sbjct: 64  MKSGECITDYFSRVMSVSNKMRFHGEQMREVTIVEKILRSLTDNFNYIVCSIEESKDTDT 123

Query: 362 LSVDELQSSLL 394
           L++DELQSSL+
Sbjct: 124 LTIDELQSSLI 134


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  190 bits (482), Expect = 1e-46
 Identities = 88/131 (67%), Positives = 114/131 (87%)
 Frame = +2

Query: 2   KDLKAKNYLFQSIDKTILKTIIQKDTSKQLWDSMKRKYQGNARVQRAQLQTLRREFEILE 181
           KDLKAKNYLFQ+ID++IL+TI++KDT+K +WDS+K+KYQG ARV+ AQLQ LR+EFE+L 
Sbjct: 66  KDLKAKNYLFQAIDRSILETILKKDTAKDIWDSLKQKYQGTARVKHAQLQALRKEFEVLH 125

Query: 182 MKMGESVNEYFSKVMLVANDMRNAGESMPDVKIVEKILRTLTEKFNYIVCSIEESKDIDQ 361
           MK GESVN+YF + +++AN MR  GE M DV I+EKILR++T K++Y+VCSIEES D+D 
Sbjct: 126 MKTGESVNDYFGRTLIIANKMRTHGERMVDVVIIEKILRSMTSKYDYVVCSIEESNDLDT 185

Query: 362 LSVDELQSSLL 394
           LS+DELQSSLL
Sbjct: 186 LSIDELQSSLL 196


>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
          Length = 1278

 Score =  187 bits (474), Expect = 1e-45
 Identities = 89/131 (67%), Positives = 111/131 (84%)
 Frame = +2

Query: 2   KDLKAKNYLFQSIDKTILKTIIQKDTSKQLWDSMKRKYQGNARVQRAQLQTLRREFEILE 181
           KDLKAKNYLFQ+ID++IL+TI+ KDTS+Q+WDSMK+KYQG+ R +R QLQ LR EFE L 
Sbjct: 65  KDLKAKNYLFQAIDRSILETILCKDTSQQIWDSMKKKYQGSMRTKRQQLQALRSEFETLR 124

Query: 182 MKMGESVNEYFSKVMLVANDMRNAGESMPDVKIVEKILRTLTEKFNYIVCSIEESKDIDQ 361
           MK GESV++YFS+ M + N MR  GE M DV ++EKILR++T KFNY+VCSIEESKD+D+
Sbjct: 125 MKPGESVSDYFSRTMAIINKMRIHGEKMEDVTVIEKILRSMTPKFNYVVCSIEESKDLDE 184

Query: 362 LSVDELQSSLL 394
           LS+DELQ SLL
Sbjct: 185 LSIDELQGSLL 195


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