BLASTX nr result

ID: Cnidium21_contig00036771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036771
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512671.1| zinc finger protein, putative [Ricinus commu...   111   5e-23
ref|XP_002529559.1| zinc finger protein, putative [Ricinus commu...   110   1e-22
ref|XP_002303746.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002299354.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
gb|AAC28190.1| contains similarity to C3HC4-type zinc fingers (P...   106   2e-21

>ref|XP_002512671.1| zinc finger protein, putative [Ricinus communis]
           gi|223548632|gb|EEF50123.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 735

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/86 (59%), Positives = 63/86 (73%)
 Frame = -1

Query: 258 VPRYLFVRCDNDPAPWSSGNSGDRPRSLPNIKELKTASEITERKESPSWGYNDEKERWMW 79
           V RYLFVRCDN+PAPW+S N GDRPR LP I EL+ A ++TER+ SPSW Y++EK  WMW
Sbjct: 406 VCRYLFVRCDNEPAPWTSDNHGDRPRPLPVIGELENAVDVTERRGSPSWDYDEEKGCWMW 465

Query: 78  LKAPPLSGKQANSQNVEDTRKTRKTR 1
            K PP S K  +  + ED +KTRK +
Sbjct: 466 KKPPPPSRKWVDGGSGEDGKKTRKAK 491


>ref|XP_002529559.1| zinc finger protein, putative [Ricinus communis]
           gi|223530971|gb|EEF32828.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 752

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/84 (59%), Positives = 61/84 (72%)
 Frame = -1

Query: 258 VPRYLFVRCDNDPAPWSSGNSGDRPRSLPNIKELKTASEITERKESPSWGYNDEKERWMW 79
           V RYLFVRCDN+PAPW+S   GDRPR LP IKEL  A++ITERKESPSW +++   RW W
Sbjct: 415 VCRYLFVRCDNEPAPWTSDEHGDRPRPLPVIKELAKATDITERKESPSWDFDESDGRWKW 474

Query: 78  LKAPPLSGKQANSQNVEDTRKTRK 7
              PP S K  N++N ED + +RK
Sbjct: 475 KIPPPQSRKPVNARNSEDLKMSRK 498


>ref|XP_002303746.1| predicted protein [Populus trichocarpa] gi|222841178|gb|EEE78725.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/84 (64%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = -1

Query: 258 VPRYLFVRCDNDPAPWSSGNSGDRPRSLPNIKELKTASEITERKESPSWGYNDEKERWMW 79
           V RYLFVRCDN+PAPW+S   GDRPR LP IKELK A +ITERK SPSW Y DEK  WMW
Sbjct: 404 VCRYLFVRCDNEPAPWTSDVQGDRPRPLPVIKELKNAIDITERKGSPSWDYEDEKSCWMW 463

Query: 78  LKAPPLSGKQ-ANSQNVEDTRKTR 10
            K PP S K+ A+S   ED +  R
Sbjct: 464 KKPPPASKKRVADSVGPEDGKVIR 487


>ref|XP_002299354.1| predicted protein [Populus trichocarpa] gi|222846612|gb|EEE84159.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
 Frame = -1

Query: 258 VPRYLFVRCDNDPAPWSSGNSGDRPRSLPNIKELKTASEITERKESPSWGYNDEKERWMW 79
           V RYLFVRCDN+PAPW+S   GDRPR+ P IKELK A +ITERK SPSW Y++EK  WMW
Sbjct: 404 VCRYLFVRCDNEPAPWTSDVQGDRPRAHPVIKELKNAIDITERKGSPSWDYDEEKSCWMW 463

Query: 78  LKAPPLSGKQ-ANSQNVEDTRKTR 10
            K PP+S K+ A+S + ED++  R
Sbjct: 464 KKPPPVSKKRVADSGDPEDSKVMR 487


>gb|AAC28190.1| contains similarity to C3HC4-type zinc fingers (Pfam: zf-C3HC4.hmm,
           score: 29.48) [Arabidopsis thaliana]
          Length = 461

 Score =  106 bits (264), Expect = 2e-21
 Identities = 45/70 (64%), Positives = 57/70 (81%)
 Frame = -1

Query: 258 VPRYLFVRCDNDPAPWSSGNSGDRPRSLPNIKELKTASEITERKESPSWGYNDEKERWMW 79
           V RYLFVRCDN+PAPW+S  SGDRPR LPNI EL+TAS++ ERKESPSW +++ + RW W
Sbjct: 363 VCRYLFVRCDNEPAPWNSDESGDRPRPLPNIPELETASDLFERKESPSWDFDEAEGRWRW 422

Query: 78  LKAPPLSGKQ 49
           +K PP + +Q
Sbjct: 423 MKPPPANHEQ 432


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