BLASTX nr result

ID: Cnidium21_contig00036755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036755
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cuc...   108   5e-22
ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
gb|ABK92530.1| unknown [Populus trichocarpa]                          108   5e-22
ref|XP_002510087.1| conserved hypothetical protein [Ricinus comm...   101   6e-20
ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   100   2e-19

>ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cucumis sativus]
           gi|449482721|ref|XP_004156384.1| PREDICTED: F-box
           protein At3g12350-like [Cucumis sativus]
          Length = 465

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/96 (53%), Positives = 67/96 (69%)
 Frame = +3

Query: 3   SLCDRKFGSKTRINKWVSAQITYKRLYKTLCELEGLIGFWRRSGDRNKNLDDYTPALLYF 182
           ++CDRK+GSKT+I  W   +ITY+ LYKTL + E LIGFWRRSG  +  +   +P L++F
Sbjct: 59  TMCDRKWGSKTQIKNWGKGKITYRLLYKTLHQWENLIGFWRRSG--SSTISVTSPPLVFF 116

Query: 183 QWGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEG 290
           +WG   + G RVSPSKNG Y V K P  W+ L+SEG
Sbjct: 117 EWGPDFLAGCRVSPSKNGTYDVFKSPFLWMTLSSEG 152


>ref|XP_002301146.1| predicted protein [Populus trichocarpa] gi|222842872|gb|EEE80419.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/96 (53%), Positives = 68/96 (70%)
 Frame = +3

Query: 3   SLCDRKFGSKTRINKWVSAQITYKRLYKTLCELEGLIGFWRRSGDRNKNLDDYTPALLYF 182
           SLCDR++GSKT+INKW + QI+YK LYKTL + E LIGFWRR G   +      P+L++F
Sbjct: 52  SLCDRRWGSKTQINKWGNGQISYKLLYKTLNKWENLIGFWRRCGQSQQKETVKPPSLVFF 111

Query: 183 QWGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEG 290
           +WG   ++G RVSPS+N  Y V+K P  WI ++ EG
Sbjct: 112 EWGSSFLSGWRVSPSQN-AYSVIKSPFLWISISPEG 146


>gb|ABK92530.1| unknown [Populus trichocarpa]
          Length = 298

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/96 (53%), Positives = 68/96 (70%)
 Frame = +3

Query: 3   SLCDRKFGSKTRINKWVSAQITYKRLYKTLCELEGLIGFWRRSGDRNKNLDDYTPALLYF 182
           SLCDR++GSKT+INKW + QI+YK LYKTL + E LIGFWRR G   +      P+L++F
Sbjct: 52  SLCDRRWGSKTQINKWGNGQISYKLLYKTLNKWENLIGFWRRCGQSQQKETVKPPSLVFF 111

Query: 183 QWGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEG 290
           +WG   ++G RVSPS+N  Y V+K P  WI ++ EG
Sbjct: 112 EWGSSFLSGWRVSPSQN-AYSVIKSPFLWISISPEG 146


>ref|XP_002510087.1| conserved hypothetical protein [Ricinus communis]
           gi|223550788|gb|EEF52274.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 425

 Score =  101 bits (252), Expect = 6e-20
 Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   SLCDRKFGSKTRINKWVSAQITYKRLYKTLCELEGLIGFWRRSGD-RNKNLDDYTPALLY 179
           S+CDR++GSKT+I KW + QI+YK LYKTL + + LIGFWRR G  + K      P L++
Sbjct: 54  SICDRRWGSKTQIKKWGNGQISYKLLYKTLNKWDNLIGFWRRCGQTQQKQTTTTGPGLVF 113

Query: 180 FQWGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEG 290
           F+WG   ++G +VSP +NG YGV KRP   + ++ +G
Sbjct: 114 FEWGPSFLSGYKVSPCQNGTYGVTKRPFLSMSISPDG 150


>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/96 (51%), Positives = 65/96 (67%)
 Frame = +3

Query: 3   SLCDRKFGSKTRINKWVSAQITYKRLYKTLCELEGLIGFWRRSGDRNKNLDDYTPALLYF 182
           +LCDR++GSKT+I KW S +ITY+ LY+TL E E LIGFWRRSG     L   +P L++F
Sbjct: 57  TLCDRRWGSKTQIKKWGSGKITYRLLYRTLIEWENLIGFWRRSG--QVTLGVASPPLIFF 114

Query: 183 QWGDCCVTGSRVSPSKNGGYGVVKRPCFWICLNSEG 290
           +W    + GSRVSPS+ G Y V+K P   + +  EG
Sbjct: 115 EWCPSFIIGSRVSPSRLGTYHVIKAPFLCMSITPEG 150


Top