BLASTX nr result

ID: Cnidium21_contig00036726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036726
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30945.3| unnamed protein product [Vitis vinifera]              152   5e-35
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi...   152   5e-35
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]   152   5e-35
ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containi...   145   6e-33
ref|XP_002316718.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  152 bits (383), Expect = 5e-35
 Identities = 72/106 (67%), Positives = 88/106 (83%)
 Frame = +2

Query: 2    QIVDKLCTFGNLDEAYKLLGKVLRTASVVDAKSCHLLIESYLKNGNALASYKVACRMFGR 181
            Q+++KLC+FGNL++AYKLLGKVLRTAS +DA +CH+LIESYL  G  L SY VACRMF R
Sbjct: 691  QVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNR 750

Query: 182  NLVPDLKLCEKVCKRLMLDRNVKEADNLMLCFVERGRMSPERMKDL 319
            NL+PDLKLCEKV K+LML+   +EAD L+L FVERGR+SP+   DL
Sbjct: 751  NLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQCQLDL 796


>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  152 bits (383), Expect = 5e-35
 Identities = 72/106 (67%), Positives = 88/106 (83%)
 Frame = +2

Query: 2   QIVDKLCTFGNLDEAYKLLGKVLRTASVVDAKSCHLLIESYLKNGNALASYKVACRMFGR 181
           Q+++KLC+FGNL++AYKLLGKVLRTAS +DA +CH+LIESYL  G  L SY VACRMF R
Sbjct: 628 QVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNR 687

Query: 182 NLVPDLKLCEKVCKRLMLDRNVKEADNLMLCFVERGRMSPERMKDL 319
           NL+PDLKLCEKV K+LML+   +EAD L+L FVERGR+SP+   DL
Sbjct: 688 NLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQCQLDL 733


>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  152 bits (383), Expect = 5e-35
 Identities = 72/106 (67%), Positives = 88/106 (83%)
 Frame = +2

Query: 2   QIVDKLCTFGNLDEAYKLLGKVLRTASVVDAKSCHLLIESYLKNGNALASYKVACRMFGR 181
           Q+++KLC+FGNL++AYKLLGKVLRTAS +DA +CH+LIESYL  G  L SY VACRMF R
Sbjct: 628 QVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNR 687

Query: 182 NLVPDLKLCEKVCKRLMLDRNVKEADNLMLCFVERGRMSPERMKDL 319
           NL+PDLKLCEKV K+LML+   +EAD L+L FVERGR+SP+   DL
Sbjct: 688 NLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERGRISPQCQLDL 733


>ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  145 bits (365), Expect = 6e-33
 Identities = 70/96 (72%), Positives = 83/96 (86%)
 Frame = +2

Query: 2   QIVDKLCTFGNLDEAYKLLGKVLRTASVVDAKSCHLLIESYLKNGNALASYKVACRMFGR 181
           Q+++KLC FGNL+EA KLLGKVLRTAS VDA +CH+L+ESYLK G A+++YKVACRMF R
Sbjct: 694 QVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRR 753

Query: 182 NLVPDLKLCEKVCKRLMLDRNVKEADNLMLCFVERG 289
           NL PDLKLCEKV K+L+LD  + EADNLML FVERG
Sbjct: 754 NLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERG 789


>ref|XP_002316718.1| predicted protein [Populus trichocarpa] gi|222859783|gb|EEE97330.1|
           predicted protein [Populus trichocarpa]
          Length = 684

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/107 (63%), Positives = 87/107 (81%)
 Frame = +2

Query: 2   QIVDKLCTFGNLDEAYKLLGKVLRTASVVDAKSCHLLIESYLKNGNALASYKVACRMFGR 181
           Q+++KLCTFGNL+ A KLLGKVLRTAS +DA +CH+L+ESYL+ G  L++YKVACRMF R
Sbjct: 576 QVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSR 635

Query: 182 NLVPDLKLCEKVCKRLMLDRNVKEADNLMLCFVERGRMSPERMKDLQ 322
           +L+PDLKLCEKVCK+LM +   +EADNL L FVERG +S   ++  Q
Sbjct: 636 SLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGNISSHCLRHSQ 682


Top