BLASTX nr result

ID: Cnidium21_contig00036704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036704
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   102   4e-20
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   102   4e-20
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   102   4e-20
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   100   9e-20
ref|XP_002317218.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = -2

Query: 302 RDIIIQRKVGGGFQRVSYIHPKLMALQYPILFPNGEDGYHNKILFQS--ADPDSDKDRDM 129
           RDI+I+ K  G  QR+   HPK MA+QYP+LFP  EDG+H  I +    A     K R  
Sbjct: 229 RDIVIEHKTDG-LQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKK 287

Query: 128 ISMKDYYSYRFQIRDNEAMTPRLGGRLFQQYIVDAFSSIEQ 6
           ++M++YY+YR Q R  EA T  +GGRLFQQY+VDAF++IE+
Sbjct: 288 VTMREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEE 328


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = -2

Query: 302 RDIIIQRKVGGGFQRVSYIHPKLMALQYPILFPNGEDGYHNKILFQS--ADPDSDKDRDM 129
           RDI+I+ K  G  QR+   HPK MA+QYP+LFP  EDG+H  I +    A     K R  
Sbjct: 229 RDIVIEHKTDG-LQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKK 287

Query: 128 ISMKDYYSYRFQIRDNEAMTPRLGGRLFQQYIVDAFSSIEQ 6
           ++M++YY+YR Q R  EA T  +GGRLFQQY+VDAF++IE+
Sbjct: 288 VTMREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEE 328


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1531

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = -2

Query: 302 RDIIIQRKVGGGFQRVSYIHPKLMALQYPILFPNGEDGYHNKILFQS--ADPDSDKDRDM 129
           RDI+I+ K  G  QR+   HPK MA+QYP+LFP  EDG+H  I +    A     K R  
Sbjct: 202 RDIVIEHKTDG-LQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKK 260

Query: 128 ISMKDYYSYRFQIRDNEAMTPRLGGRLFQQYIVDAFSSIEQ 6
           ++M++YY+YR Q R  EA T  +GGRLFQQY+VDAF++IE+
Sbjct: 261 VTMREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEE 301


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/101 (49%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = -2

Query: 302 RDIIIQRKVGGGFQRVSYIHPKLMALQYPILFPNGEDGYHNKILFQS--ADPDSDKDRDM 129
           RDI+I+ K  G  QR+   HPK MA+QYP+LFP  EDG+H  I +    A     K R  
Sbjct: 229 RDIVIEHKTDG-LQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKK 287

Query: 128 ISMKDYYSYRFQIRDNEAMTPRLGGRLFQQYIVDAFSSIEQ 6
           +++++YY+YR Q R  EA T  +GGRLFQQY+VDAF++IE+
Sbjct: 288 VTLREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEE 328


>ref|XP_002317218.1| predicted protein [Populus trichocarpa] gi|222860283|gb|EEE97830.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/100 (47%), Positives = 68/100 (68%)
 Frame = -2

Query: 305 NRDIIIQRKVGGGFQRVSYIHPKLMALQYPILFPNGEDGYHNKILFQSADPDSDKDRDMI 126
           +RDIII+       +R+S +HPK M+LQYP+LFP GEDGYH  ILF + +  +   R  +
Sbjct: 376 DRDIIIEG-YSRNLRRISKLHPKFMSLQYPLLFPYGEDGYHTDILFTNQEHYTPSKRQKV 434

Query: 125 SMKDYYSYRFQIRDNEAMTPRLGGRLFQQYIVDAFSSIEQ 6
           +M+ YY+Y  Q R  ++ T   GGRL+QQ++VDAF ++EQ
Sbjct: 435 TMRAYYAYVIQERLGDSSTLTKGGRLYQQFLVDAFMNVEQ 474


Top