BLASTX nr result

ID: Cnidium21_contig00036684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036684
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...    62   4e-08
gb|EEC76398.1| hypothetical protein OsI_14033 [Oryza sativa Indi...    58   7e-07
ref|NP_001051677.1| Os03g0812000 [Oryza sativa Japonica Group] g...    58   7e-07
sp|Q7XZF7.2|GYRA_ORYSJ RecName: Full=Probable DNA gyrase subunit...    58   7e-07
gb|ABF99505.1| DNA gyrase subunit A, putative, expressed [Oryza ...    58   7e-07

>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/40 (85%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
 Frame = -3

Query: 357  ISIQSRYARGVILMRLEHMGKIQSASLIS-AEPGPEDSDA 241
            ISIQSRYARGVILMRLEH GKIQSASLIS A+  PED DA
Sbjct: 891  ISIQSRYARGVILMRLEHAGKIQSASLISAADADPEDEDA 930


>gb|EEC76398.1| hypothetical protein OsI_14033 [Oryza sativa Indica Group]
           gi|222626031|gb|EEE60163.1| hypothetical protein
           OsJ_13077 [Oryza sativa Japonica Group]
          Length = 872

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -3

Query: 357 ISIQSRYARGVILMRLEHMGKIQSASLISAEPGPEDSDAEEFDVVS 220
           ISI+SR ARGVILMRLEH GKIQSASLISA    E+ D E   ++S
Sbjct: 813 ISIRSRSARGVILMRLEHAGKIQSASLISAAEEEEEQDPESASLIS 858


>ref|NP_001051677.1| Os03g0812000 [Oryza sativa Japonica Group]
           gi|113550148|dbj|BAF13591.1| Os03g0812000, partial
           [Oryza sativa Japonica Group]
          Length = 438

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -3

Query: 357 ISIQSRYARGVILMRLEHMGKIQSASLISAEPGPEDSDAEEFDVVS 220
           ISI+SR ARGVILMRLEH GKIQSASLISA    E+ D E   ++S
Sbjct: 379 ISIRSRSARGVILMRLEHAGKIQSASLISAAEEEEEQDPESASLIS 424


>sp|Q7XZF7.2|GYRA_ORYSJ RecName: Full=Probable DNA gyrase subunit A,
            chloroplastic/mitochondrial; Flags: Precursor
          Length = 939

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -3

Query: 357  ISIQSRYARGVILMRLEHMGKIQSASLISAEPGPEDSDAEEFDVVS 220
            ISI+SR ARGVILMRLEH GKIQSASLISA    E+ D E   ++S
Sbjct: 880  ISIRSRSARGVILMRLEHAGKIQSASLISAAEEEEEQDPESASLIS 925


>gb|ABF99505.1| DNA gyrase subunit A, putative, expressed [Oryza sativa Japonica
           Group] gi|215765245|dbj|BAG86942.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 356

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -3

Query: 357 ISIQSRYARGVILMRLEHMGKIQSASLISAEPGPEDSDAEEFDVVS 220
           ISI+SR ARGVILMRLEH GKIQSASLISA    E+ D E   ++S
Sbjct: 297 ISIRSRSARGVILMRLEHAGKIQSASLISAAEEEEEQDPESASLIS 342


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