BLASTX nr result

ID: Cnidium21_contig00036679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036679
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527586.1| copine, putative [Ricinus communis] gi|22353...   102   3e-20
ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_003546661.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    95   5e-18
ref|XP_004172545.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    93   2e-17
ref|XP_002311280.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_002527586.1| copine, putative [Ricinus communis] gi|223533045|gb|EEF34806.1|
           copine, putative [Ricinus communis]
          Length = 213

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/91 (53%), Positives = 61/91 (67%)
 Frame = +2

Query: 2   VAALMEIPIQYKAATEFGLVGNVTGKXXXXXXXXXXXXXXXXXXSLSREPNNLPTSVEDE 181
           +AALMEIP QYKAA EFG+VG  TG+                  ++  EP+N+ + VEDE
Sbjct: 106 LAALMEIPFQYKAALEFGIVGRTTGRSKKIVPRPPPVPYAHRP-TIDHEPSNVSSPVEDE 164

Query: 182 RNQVCAICLTNNKDMAFNCGHMTCRECGTQV 274
           R Q C ICLTN KD+AF+CGHMTCRECG++V
Sbjct: 165 RTQACPICLTNAKDLAFDCGHMTCRECGSRV 195


>ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|222865197|gb|EEF02328.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/91 (50%), Positives = 58/91 (63%)
 Frame = +2

Query: 2   VAALMEIPIQYKAATEFGLVGNVTGKXXXXXXXXXXXXXXXXXXSLSREPNNLPTSVEDE 181
           +AALMEIP+QYKAA EFG++G   G+                   L REP ++ + V DE
Sbjct: 289 LAALMEIPLQYKAAVEFGIIGRSMGQAKKIVPRPPPVPYSRRPV-LDREPTHVSSPVLDE 347

Query: 182 RNQVCAICLTNNKDMAFNCGHMTCRECGTQV 274
           R Q C ICLTN KD+AF CGHMTCR+CG++V
Sbjct: 348 RTQACPICLTNRKDLAFGCGHMTCRDCGSRV 378


>ref|XP_003546661.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 417

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   VAALMEIPIQYKAATEFGLVGNVTGKXXXXXXXXXXXXXXXXXXSLSREPNNLPTSVEDE 181
           +AALMEIP QYKAATE GL+G  TG+                    +R  +N PT ++DE
Sbjct: 308 LAALMEIPFQYKAATELGLLGRATGRSNKIVPRPPPAPYSQLVPP-ARVLSNTPTFMDDE 366

Query: 182 RNQV-CAICLTNNKDMAFNCGHMTCRECGTQV 274
           RNQ+ CAICLTN KD+AF CGHMTCR+CG+++
Sbjct: 367 RNQMACAICLTNKKDLAFGCGHMTCRDCGSRL 398


>ref|XP_004172545.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like, partial [Cucumis
           sativus]
          Length = 264

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/91 (49%), Positives = 54/91 (59%)
 Frame = +2

Query: 2   VAALMEIPIQYKAATEFGLVGNVTGKXXXXXXXXXXXXXXXXXXSLSREPNNLPTSVEDE 181
           +AALME+P QYKA TE GL+G VTGK                    S   +   TS  DE
Sbjct: 155 LAALMEVPFQYKAVTEMGLMGRVTGKARHIVPRPPPTCYTRSTRLTSTPSDTSSTSASDE 214

Query: 182 RNQVCAICLTNNKDMAFNCGHMTCRECGTQV 274
            +QVC ICLT  KD+AF CGHMTCRECG+++
Sbjct: 215 HSQVCPICLTAGKDLAFGCGHMTCRECGSRL 245


>ref|XP_002311280.1| predicted protein [Populus trichocarpa] gi|222851100|gb|EEE88647.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/91 (49%), Positives = 56/91 (61%)
 Frame = +2

Query: 2   VAALMEIPIQYKAATEFGLVGNVTGKXXXXXXXXXXXXXXXXXXSLSREPNNLPTSVEDE 181
           + ALMEIP QYKAA EFG++G  TG+                     REP N+ + V DE
Sbjct: 235 LTALMEIPFQYKAAVEFGVIGCSTGRAKKIVPRPPPVPYSSRSVQC-REPTNVSSPVLDE 293

Query: 182 RNQVCAICLTNNKDMAFNCGHMTCRECGTQV 274
           R Q C ICLT+ KD+AF CGHMTCR+CG++V
Sbjct: 294 RTQACPICLTDGKDLAFGCGHMTCRDCGSRV 324


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