BLASTX nr result

ID: Cnidium21_contig00036669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036669
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...   120   1e-25
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote...   110   1e-22
emb|CBI24843.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicag...   100   2e-19
ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arab...    95   5e-18

>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score =  120 bits (301), Expect = 1e-25
 Identities = 63/105 (60%), Positives = 78/105 (74%)
 Frame = -3

Query: 514 DNTPAGSQGTPDFTRKQSGASEIDMLSVRSRAVAKFLKSRLSVTPISERQSEDLSLNKIL 335
           D TP GS GT D          +  LS+R+RAVA++L++   + PISE  S +LSLNKIL
Sbjct: 664 DMTPTGSPGTQD----------VSTLSIRTRAVAQYLQNHSPINPISEDPSMELSLNKIL 713

Query: 334 EGKRRKVSARMVFETLVLKNCGLVDLQQEEPYGEITLKLMPKLAK 200
           EGK RK++ARM FETLVLKN GLVD+QQEEPYG+ITLK+ PKL+K
Sbjct: 714 EGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSK 758


>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
            sativus]
          Length = 908

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/107 (54%), Positives = 78/107 (72%)
 Frame = -3

Query: 514  DNTPAGSQGTPDFTRKQSGASEIDMLSVRSRAVAKFLKSRLSVTPISERQSEDLSLNKIL 335
            D++PAGSQGT            +D LSVR+RA+ ++L+S   +  IS+  ++DLSLN IL
Sbjct: 811  DSSPAGSQGTRG----------VDSLSVRTRALGRYLRSLSPIKSISDNSNQDLSLNGIL 860

Query: 334  EGKRRKVSARMVFETLVLKNCGLVDLQQEEPYGEITLKLMPKLAKDQ 194
            EGKRRK+ ARM +ETLVLK+ GL+D+QQ+ PYG+ITLKL PKL+  Q
Sbjct: 861  EGKRRKLCARMFYETLVLKSYGLIDVQQDVPYGDITLKLTPKLSMVQ 907


>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  103 bits (258), Expect = 1e-20
 Identities = 52/76 (68%), Positives = 64/76 (84%)
 Frame = -3

Query: 427 SRAVAKFLKSRLSVTPISERQSEDLSLNKILEGKRRKVSARMVFETLVLKNCGLVDLQQE 248
           S AVA++L++   + PISE  S +LSLNKILEGK RK++ARM FETLVLKN GLVD+QQE
Sbjct: 631 SVAVAQYLQNHSPINPISEDPSMELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQE 690

Query: 247 EPYGEITLKLMPKLAK 200
           EPYG+ITLK+ PKL+K
Sbjct: 691 EPYGDITLKMTPKLSK 706


>ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicago truncatula]
           gi|355487106|gb|AES68309.1| Sister chromatid cohesion 1
           protein [Medicago truncatula]
          Length = 737

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/96 (54%), Positives = 66/96 (68%)
 Frame = -3

Query: 487 TPDFTRKQSGASEIDMLSVRSRAVAKFLKSRLSVTPISERQSEDLSLNKILEGKRRKVSA 308
           TP     QS +  ID LS R+R +A++LK     T I E+ +ED SLNKIL+GK RK++A
Sbjct: 639 TPATASSQSTSRSIDTLSGRTRGLAQYLKDYSPCTTIPEQPAEDFSLNKILDGKTRKIAA 698

Query: 307 RMVFETLVLKNCGLVDLQQEEPYGEITLKLMPKLAK 200
           RM FE LVLK   L+D+QQEEPYG+I+ KL P L K
Sbjct: 699 RMFFEVLVLKTHDLIDVQQEEPYGDISFKLTPALDK 734


>ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arabidopsis lyrata subsp.
           lyrata] gi|297322348|gb|EFH52769.1| hypothetical protein
           ARALYDRAFT_486422 [Arabidopsis lyrata subsp. lyrata]
          Length = 696

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/84 (55%), Positives = 65/84 (77%)
 Frame = -3

Query: 457 ASEIDMLSVRSRAVAKFLKSRLSVTPISERQSEDLSLNKILEGKRRKVSARMVFETLVLK 278
           + + D L+ R+RA+A++L+ R S +P S   S DLSL++IL GK RK++ARM FETLVLK
Sbjct: 607 SQDSDALTGRARALAQYLRQRSSSSPTSSHPSGDLSLSEILAGKTRKLAARMFFETLVLK 666

Query: 277 NCGLVDLQQEEPYGEITLKLMPKL 206
           + GL+D+QQ+ PYG+I LKLMP L
Sbjct: 667 SRGLIDMQQDRPYGDIALKLMPAL 690


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