BLASTX nr result

ID: Cnidium21_contig00036656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036656
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853...   110   2e-22
emb|CBI23078.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002877673.1| transducin family protein [Arabidopsis lyrat...   109   3e-22
gb|AAG52177.1|AC012329_4 hypothetical protein; 45165-40041 [Arab...   107   8e-22
ref|NP_190509.2| transducin/WD40 domain-containing protein [Arab...   107   8e-22

>ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853102 [Vitis vinifera]
          Length = 864

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/95 (55%), Positives = 60/95 (63%)
 Frame = -3

Query: 387  QGTECKNGVVQKHKLTRCAASMLVNDITPTWFCVCCHRWSLKLAPRALFSMLQYPSDASN 208
            QG +C  GV Q HKL RCA  M V   T +WFC CC R+S KLAP   F M +YP D  +
Sbjct: 769  QGAKCSGGVGQSHKLARCAVCMQVCPPTSSWFCTCCQRYSSKLAPPQFFLMPRYPLDFKS 828

Query: 207  DPKITTLRESSKPMCVFCGILLQRSQPEFLLAASP 103
              +  TL   SKP C FCGILLQR QP FLL+ASP
Sbjct: 829  STESCTLNSFSKPFCPFCGILLQRLQPVFLLSASP 863


>emb|CBI23078.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/95 (55%), Positives = 60/95 (63%)
 Frame = -3

Query: 387 QGTECKNGVVQKHKLTRCAASMLVNDITPTWFCVCCHRWSLKLAPRALFSMLQYPSDASN 208
           QG +C  GV Q HKL RCA  M V   T +WFC CC R+S KLAP   F M +YP D  +
Sbjct: 705 QGAKCSGGVGQSHKLARCAVCMQVCPPTSSWFCTCCQRYSSKLAPPQFFLMPRYPLDFKS 764

Query: 207 DPKITTLRESSKPMCVFCGILLQRSQPEFLLAASP 103
             +  TL   SKP C FCGILLQR QP FLL+ASP
Sbjct: 765 STESCTLNSFSKPFCPFCGILLQRLQPVFLLSASP 799


>ref|XP_002877673.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323511|gb|EFH53932.1| transducin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 893

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/86 (56%), Positives = 62/86 (72%)
 Frame = -3

Query: 357  QKHKLTRCAASMLVNDITPTWFCVCCHRWSLKLAPRALFSMLQYPSDASNDPKITTLRES 178
            Q HKL RC  SM V   TP WFC CC+R +L+LAP  LF++  +PSD  + PK +  + +
Sbjct: 808  QSHKLERCCVSMQVCPPTPLWFCKCCNRMTLELAPETLFALPSFPSDLKSLPKSSFSKAA 867

Query: 177  SKPMCVFCGILLQRSQPEFLLAASPV 100
            SKP C+FCG+LLQR QPEFLL+ASPV
Sbjct: 868  SKPFCLFCGVLLQRKQPEFLLSASPV 893


>gb|AAG52177.1|AC012329_4 hypothetical protein; 45165-40041 [Arabidopsis thaliana]
          Length = 798

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = -3

Query: 357 QKHKLTRCAASMLVNDITPTWFCVCCHRWSLKLAPRALFSMLQYPSDASNDPKITTLRES 178
           + HKL RC  SM V   TP WFC CC+R +L+LAP  LF++  +PSD  + PK +  + +
Sbjct: 713 ESHKLERCCVSMQVCPPTPLWFCKCCNRMTLELAPETLFALPSFPSDLKSLPKSSFSKVA 772

Query: 177 SKPMCVFCGILLQRSQPEFLLAASPV 100
           SKP C+FCG+LLQR QPEFLL+ASPV
Sbjct: 773 SKPFCLFCGVLLQRKQPEFLLSASPV 798


>ref|NP_190509.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
            gi|332645016|gb|AEE78537.1| transducin/WD40
            domain-containing protein [Arabidopsis thaliana]
          Length = 892

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = -3

Query: 357  QKHKLTRCAASMLVNDITPTWFCVCCHRWSLKLAPRALFSMLQYPSDASNDPKITTLRES 178
            + HKL RC  SM V   TP WFC CC+R +L+LAP  LF++  +PSD  + PK +  + +
Sbjct: 807  ESHKLERCCVSMQVCPPTPLWFCKCCNRMTLELAPETLFALPSFPSDLKSLPKSSFSKVA 866

Query: 177  SKPMCVFCGILLQRSQPEFLLAASPV 100
            SKP C+FCG+LLQR QPEFLL+ASPV
Sbjct: 867  SKPFCLFCGVLLQRKQPEFLLSASPV 892


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