BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036643
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517801.1| DNA topoisomerase II, putative [Ricinus comm...   199   1e-49
dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]            195   4e-48
emb|CBI24922.3| unnamed protein product [Vitis vinifera]              194   5e-48
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   194   5e-48
emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]     194   8e-48

>ref|XP_002517801.1| DNA topoisomerase II, putative [Ricinus communis]
           gi|223543073|gb|EEF44608.1| DNA topoisomerase II,
           putative [Ricinus communis]
          Length = 197

 Score =  199 bits (507), Expect = 1e-49
 Identities = 97/126 (76%), Positives = 110/126 (87%)
 Frame = +1

Query: 1   PLQTSNNANISKTIEETYQKKTQLEHILLRPDTYIGSIEKHTALLWVYEDSQMINRSVSY 180
           PL TSNNAN  KTIEETYQKK+QLEHILLRPDTYIGSIEKHT  LWVYED +M+NR+V+Y
Sbjct: 9   PLMTSNNAN-KKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQTLWVYEDEKMVNRNVTY 67

Query: 181 VPGLYKIFDEILVNAADNGRRDTKMNCVEVDIKVEMNLISVYNNGAGIPVAIHKDHGVYV 360
           VPGLYKIFDEILVNAADN +RD  M+ ++V I VE N+ISVYNNG G+PV IHK+ GVYV
Sbjct: 68  VPGLYKIFDEILVNAADNKQRDPTMDALKVVIDVENNMISVYNNGDGVPVEIHKEEGVYV 127

Query: 361 PELVFG 378
           PEL+FG
Sbjct: 128 PELIFG 133


>dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]
          Length = 1469

 Score =  195 bits (495), Expect = 4e-48
 Identities = 96/136 (70%), Positives = 109/136 (80%), Gaps = 10/136 (7%)
 Frame = +1

Query: 1   PLQTSNNANI----------SKTIEETYQKKTQLEHILLRPDTYIGSIEKHTALLWVYED 150
           PL TSNNANI           KTIE+ YQKKTQLEHILLRPDTYIGSIE+HT  LWVYE+
Sbjct: 8   PLTTSNNANIPPPDAAGGGSKKTIEQAYQKKTQLEHILLRPDTYIGSIERHTQTLWVYEN 67

Query: 151 SQMINRSVSYVPGLYKIFDEILVNAADNGRRDTKMNCVEVDIKVEMNLISVYNNGAGIPV 330
            QM+ +S++YVPGLYKIFDEILVNAADN +RD KMN V+V I VE N ISVYNNG G+PV
Sbjct: 68  EQMVQKSITYVPGLYKIFDEILVNAADNKQRDPKMNSVKVTIDVESNCISVYNNGDGVPV 127

Query: 331 AIHKDHGVYVPELVFG 378
            IH++ GVYVPEL+FG
Sbjct: 128 EIHQEEGVYVPELIFG 143


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/131 (72%), Positives = 112/131 (85%), Gaps = 5/131 (3%)
 Frame = +1

Query: 1   PLQTSNNANI-----SKTIEETYQKKTQLEHILLRPDTYIGSIEKHTALLWVYEDSQMIN 165
           PLQ+SNNAN+      KTIEETYQKK+QLEHILLRPDTYIGSIEKHT  LWV+E+++M++
Sbjct: 8   PLQSSNNANMPAKPAGKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQALWVFENNEMVH 67

Query: 166 RSVSYVPGLYKIFDEILVNAADNGRRDTKMNCVEVDIKVEMNLISVYNNGAGIPVAIHKD 345
           RSVSYVPGLYKIFDEILVNAADN +RD  M+ V+V I VE N ISVYNNG G+PV IH++
Sbjct: 68  RSVSYVPGLYKIFDEILVNAADNKQRDPSMDSVKVVIDVEKNCISVYNNGDGVPVEIHQE 127

Query: 346 HGVYVPELVFG 378
            GVYVPE++FG
Sbjct: 128 EGVYVPEMIFG 138


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/131 (72%), Positives = 112/131 (85%), Gaps = 5/131 (3%)
 Frame = +1

Query: 1   PLQTSNNANI-----SKTIEETYQKKTQLEHILLRPDTYIGSIEKHTALLWVYEDSQMIN 165
           PLQ+SNNAN+      KTIEETYQKK+QLEHILLRPDTYIGSIEKHT  LWV+E+++M++
Sbjct: 8   PLQSSNNANMPAKPAGKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQALWVFENNEMVH 67

Query: 166 RSVSYVPGLYKIFDEILVNAADNGRRDTKMNCVEVDIKVEMNLISVYNNGAGIPVAIHKD 345
           RSVSYVPGLYKIFDEILVNAADN +RD  M+ V+V I VE N ISVYNNG G+PV IH++
Sbjct: 68  RSVSYVPGLYKIFDEILVNAADNKQRDPSMDSVKVVIDVEKNCISVYNNGDGVPVEIHQE 127

Query: 346 HGVYVPELVFG 378
            GVYVPE++FG
Sbjct: 128 EGVYVPEMIFG 138


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
          Length = 1467

 Score =  194 bits (492), Expect = 8e-48
 Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 11/137 (8%)
 Frame = +1

Query: 1   PLQTSNNANIS-----------KTIEETYQKKTQLEHILLRPDTYIGSIEKHTALLWVYE 147
           PLQTSNNANI            KTIEE YQKK+QLEHILLRPDTYIGSIEKHT+ LWVY+
Sbjct: 8   PLQTSNNANIDHPAPTDGGGKGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTSNLWVYQ 67

Query: 148 DSQMINRSVSYVPGLYKIFDEILVNAADNGRRDTKMNCVEVDIKVEMNLISVYNNGAGIP 327
           + +M+NRS++YVPGLYKIFDEILVNAADN +RD  M+ V+V I VE N ISVYNNGAG+P
Sbjct: 68  NGEMVNRSITYVPGLYKIFDEILVNAADNKQRDPSMDSVKVTIDVEQNSISVYNNGAGVP 127

Query: 328 VAIHKDHGVYVPELVFG 378
           V IH++  VYVPEL+FG
Sbjct: 128 VEIHQEERVYVPELIFG 144