BLASTX nr result

ID: Cnidium21_contig00036626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036626
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513535.1| hypothetical protein RCOM_1578820 [Ricinus c...    92   9e-17
ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260...    90   3e-16
emb|CBI24209.3| unnamed protein product [Vitis vinifera]               90   3e-16
emb|CAN78969.1| hypothetical protein VITISV_022739 [Vitis vinifera]    90   3e-16
ref|XP_003607305.1| Chromodomain helicase DNA binding protein [M...    86   4e-15

>ref|XP_002513535.1| hypothetical protein RCOM_1578820 [Ricinus communis]
            gi|223547443|gb|EEF48938.1| hypothetical protein
            RCOM_1578820 [Ricinus communis]
          Length = 1915

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 37/78 (47%), Positives = 57/78 (73%)
 Frame = -3

Query: 592  PLKRAKKSIRGAILLGIDPYDRLFYNSCGYLLVSDSADIEFPFRYYHVNDFTAVLEAIKS 413
            P  + + S+RGA LLG+DPY RL+++SCGYLLVS+S + E  F YYH +D  AV+E ++S
Sbjct: 782  PWMKTRNSLRGAELLGVDPYGRLYFSSCGYLLVSESCETESSFNYYHRDDLNAVIEVLRS 841

Query: 412  SHLFYNTLLSEIMKYWNV 359
            S + Y+++L  I+ +W +
Sbjct: 842  SEMIYSSILKAILNHWEI 859


>ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260139 [Vitis vinifera]
          Length = 1976

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
 Frame = -3

Query: 592  PLKRAKKSIRGAILLGIDPYDRLFYNSCGYLLVSDSADIEFPFRYYHVNDFTAVLEAIKS 413
            P  + +KS+RGA LLG+DP+ RL+++S GYLLVSDS D E  F +Y  N+   V+E +K 
Sbjct: 644  PWMKQRKSLRGAELLGVDPHGRLYFSSYGYLLVSDSCDTESSFNHYSRNELNDVIEVLKF 703

Query: 412  SHLFYNTLLSEIMKYWNVSAKV---TSEIGSKSVTVSIDYMSDRPMPAEPLVPRVLVPLE 242
            S + Y  +++ I K+W  S  +   TS + S++  +  D +      A  + P    P  
Sbjct: 704  SEIHYGEIITAICKHWGSSVNLNGATSSLDSENHAIFSDMVRKAQTTAICMTPLPWTPET 763

Query: 241  TCLEDDTRDKGKLVDKSSVS-TISGNLSEPEVLDNS--INAS 125
              +++++ D+ K  +KS    ++S  +S+   L NS  +N+S
Sbjct: 764  CAVKEESTDERKPGEKSVAEVSLSCGVSKSITLLNSTIVNSS 805


>emb|CBI24209.3| unnamed protein product [Vitis vinifera]
          Length = 1805

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
 Frame = -3

Query: 592  PLKRAKKSIRGAILLGIDPYDRLFYNSCGYLLVSDSADIEFPFRYYHVNDFTAVLEAIKS 413
            P  + +KS+RGA LLG+DP+ RL+++S GYLLVSDS D E  F +Y  N+   V+E +K 
Sbjct: 630  PWMKQRKSLRGAELLGVDPHGRLYFSSYGYLLVSDSCDTESSFNHYSRNELNDVIEVLKF 689

Query: 412  SHLFYNTLLSEIMKYWNVSAKV---TSEIGSKSVTVSIDYMSDRPMPAEPLVPRVLVPLE 242
            S + Y  +++ I K+W  S  +   TS + S++  +  D +      A  + P    P  
Sbjct: 690  SEIHYGEIITAICKHWGSSVNLNGATSSLDSENHAIFSDMVRKAQTTAICMTPLPWTPET 749

Query: 241  TCLEDDTRDKGKLVDKSSVS-TISGNLSEPEVLDNS--INAS 125
              +++++ D+ K  +KS    ++S  +S+   L NS  +N+S
Sbjct: 750  CAVKEESTDERKPGEKSVAEVSLSCGVSKSITLLNSTIVNSS 791


>emb|CAN78969.1| hypothetical protein VITISV_022739 [Vitis vinifera]
          Length = 1318

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
 Frame = -3

Query: 592  PLKRAKKSIRGAILLGIDPYDRLFYNSCGYLLVSDSADIEFPFRYYHVNDFTAVLEAIKS 413
            P  + +KS+RGA LLG+DP+ RL+++S GYLLVSDS D E  F +Y  N+   V+E +K 
Sbjct: 628  PWMKQRKSLRGAELLGVDPHGRLYFSSYGYLLVSDSCDTESSFNHYSRNELNDVIEVLKF 687

Query: 412  SHLFYNTLLSEIMKYWNVSAKV---TSEIGSKSVTVSIDYMSDRPMPAEPLVPRVLVPLE 242
            S + Y  +++ I K+W  S  +   TS + S++  +  D +      A  + P    P  
Sbjct: 688  SEIHYGEIITAICKHWGSSVNLNGATSSLDSENHAIFSDMVRKAQTTAICMTPLPWTPET 747

Query: 241  TCLEDDTRDKGKLVDKSSVS-TISGNLSEPEVLDNS--INAS 125
              +++++ D+ K  +KS    ++S  +S+   L NS  +N+S
Sbjct: 748  CAVKEESTDERKPGEKSVAEVSLSCGVSKSITLLNSTIVNSS 789


>ref|XP_003607305.1| Chromodomain helicase DNA binding protein [Medicago truncatula]
            gi|355508360|gb|AES89502.1| Chromodomain helicase DNA
            binding protein [Medicago truncatula]
          Length = 1573

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
 Frame = -3

Query: 583  RAKKSIRGAILLGIDPYDRLFYNSCGYLLVSDSADIEFPFRYYHVNDFTAVLEAIKSSHL 404
            ++++S+RGA LLG+DP+  L+++SCGYLLVS+S+D    F YYH ND   V+E +KS   
Sbjct: 850  KSRRSLRGADLLGMDPHGCLYFDSCGYLLVSNSSDAGSLFNYYHRNDIHVVIEVLKSMGA 909

Query: 403  FYNTLLSEIMKYWNVSAKVTSEIGSKSVTVSIDYMSDRPMPAE-PLVPRVLVPL---ETC 236
             Y  LL  I K+W++ + + +E  S +V  +     +  M AE    P  L P    E C
Sbjct: 910  LYGDLLMTICKHWDLPSDLNAEASSLAV-FNRSSCKNMQMTAEYYATPTSLAPFTSSEPC 968

Query: 235  LEDDTRDKGKLVDKSS 188
            +  +  D  K + K+S
Sbjct: 969  MGKNLVDDHKKLKKNS 984


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