BLASTX nr result

ID: Cnidium21_contig00036606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036606
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus com...   114   1e-23
ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002873421.1| ribosomal protein L17 family protein [Arabid...   113   2e-23
ref|NP_001237810.1| uncharacterized protein LOC100305861 [Glycin...   113   2e-23
ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis ...   112   3e-23

>ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus communis]
           gi|223543607|gb|EEF45136.1| ribosomal protein L17,
           putative [Ricinus communis]
          Length = 160

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/77 (74%), Positives = 59/77 (76%)
 Frame = +1

Query: 1   ELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRXXXXXXXXXXXXXXXXXW 180
           ELAYRYKDR GGYTR+LRTRIRVGDAAPMAYIEFIDRENELR                 W
Sbjct: 79  ELAYRYKDREGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRKSKPPTPQPPQRDPLDPW 138

Query: 181 TRSRLSKQFAPPKEEKN 231
           TRSRLSKQFAPPKEEK+
Sbjct: 139 TRSRLSKQFAPPKEEKS 155


>ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|222856472|gb|EEE94019.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/77 (72%), Positives = 60/77 (77%)
 Frame = +1

Query: 1   ELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRXXXXXXXXXXXXXXXXXW 180
           E+AYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR                 W
Sbjct: 79  EMAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRQSKPPTPQPPQRAPLDPW 138

Query: 181 TRSRLSKQFAPPKEEKN 231
           TRSRL++QFAPPKEEK+
Sbjct: 139 TRSRLTRQFAPPKEEKS 155


>ref|XP_002873421.1| ribosomal protein L17 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319258|gb|EFH49680.1| ribosomal protein
           L17 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 160

 Score =  113 bits (283), Expect = 2e-23
 Identities = 57/77 (74%), Positives = 59/77 (76%)
 Frame = +1

Query: 1   ELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRXXXXXXXXXXXXXXXXXW 180
           ELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELR                 W
Sbjct: 79  ELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRQSKPATPQPPQRVPLDPW 138

Query: 181 TRSRLSKQFAPPKEEKN 231
            RSRL+KQFAPPKEEK+
Sbjct: 139 ERSRLTKQFAPPKEEKS 155


>ref|NP_001237810.1| uncharacterized protein LOC100305861 [Glycine max]
           gi|255626807|gb|ACU13748.1| unknown [Glycine max]
          Length = 159

 Score =  113 bits (283), Expect = 2e-23
 Identities = 56/77 (72%), Positives = 60/77 (77%)
 Frame = +1

Query: 1   ELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRXXXXXXXXXXXXXXXXXW 180
           ELAYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEFIDRENELR                 W
Sbjct: 79  ELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRQAKAPTPQPPQRAPLDPW 138

Query: 181 TRSRLSKQFAPPKEEKN 231
           TRSRLS+QFAPPKE+K+
Sbjct: 139 TRSRLSRQFAPPKEDKS 155


>ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis vinifera]
           gi|296088573|emb|CBI37564.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  112 bits (281), Expect = 3e-23
 Identities = 56/77 (72%), Positives = 59/77 (76%)
 Frame = +1

Query: 1   ELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRXXXXXXXXXXXXXXXXXW 180
           ELAYRYKDRAGGYTR+LRTRIRVGDAAPMAYIEFIDRENELR                 W
Sbjct: 79  ELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRQSKPATPQPPQRVPLDPW 138

Query: 181 TRSRLSKQFAPPKEEKN 231
           TRSRL KQFAPPKE+K+
Sbjct: 139 TRSRLCKQFAPPKEDKS 155


Top