BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036601
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU85219.1| RNA polymerase beta subunit [Anethum graveolens]       166   2e-39
ref|YP_740107.1| RNA polymerase beta' subunit [Daucus carota] gi...   166   2e-39
ref|YP_004222636.1| RNA polymerase beta' subunit [Anthriscus cer...   165   4e-39
gb|ADX99121.1| RNA polymerase beta II subunit [Citharexylum ligu...   164   9e-39
gb|ADX99119.1| RNA polymerase beta II subunit [Citharexylum mont...   164   9e-39

>gb|ABU85219.1| RNA polymerase beta subunit [Anethum graveolens]
          Length = 1386

 Score =  166 bits (420), Expect = 2e-39
 Identities = 87/91 (95%), Positives = 87/91 (95%)
 Frame = -1

Query: 298  LVVLDWMSNVFLPGELIGLLRAERMGRALEEAICYRAVLLGITKASLNTQSFISEVSFQE 119
            LV  D MSNVFLPGELIGLLRAERMGRALEEAICYRAVLLGITKASLNTQSFISE SFQE
Sbjct: 1233 LVSEDGMSNVFLPGELIGLLRAERMGRALEEAICYRAVLLGITKASLNTQSFISEASFQE 1292

Query: 118  TARVLAKAALRGRIDWLKGLKENVVLGGMIP 26
            TARVLAKAALRGRIDWLKGLKENVVLGGMIP
Sbjct: 1293 TARVLAKAALRGRIDWLKGLKENVVLGGMIP 1323


>ref|YP_740107.1| RNA polymerase beta' subunit [Daucus carota]
            gi|122239969|sp|Q0G9X2.1|RPOC2_DAUCA RecName:
            Full=DNA-directed RNA polymerase subunit beta''; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta''; Short=RNA polymerase subunit beta''
            gi|113200898|gb|ABI32414.1| RNA polymerase beta' subunit
            [Daucus carota]
          Length = 1390

 Score =  166 bits (420), Expect = 2e-39
 Identities = 87/91 (95%), Positives = 87/91 (95%)
 Frame = -1

Query: 298  LVVLDWMSNVFLPGELIGLLRAERMGRALEEAICYRAVLLGITKASLNTQSFISEVSFQE 119
            LV  D MSNVFLPGELIGLLRAERMGRALEEAICYRAVLLGITKASLNTQSFISE SFQE
Sbjct: 1233 LVSEDGMSNVFLPGELIGLLRAERMGRALEEAICYRAVLLGITKASLNTQSFISEASFQE 1292

Query: 118  TARVLAKAALRGRIDWLKGLKENVVLGGMIP 26
            TARVLAKAALRGRIDWLKGLKENVVLGGMIP
Sbjct: 1293 TARVLAKAALRGRIDWLKGLKENVVLGGMIP 1323


>ref|YP_004222636.1| RNA polymerase beta' subunit [Anthriscus cerefolium]
            gi|289645565|gb|ADD13628.1| RNA polymerase beta' subunit
            [Anthriscus cerefolium]
          Length = 1390

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/91 (94%), Positives = 87/91 (95%)
 Frame = -1

Query: 298  LVVLDWMSNVFLPGELIGLLRAERMGRALEEAICYRAVLLGITKASLNTQSFISEVSFQE 119
            LV  D MSNVFLPGELIGLLR+ERMGRALEEAICYRAVLLGITKASLNTQSFISE SFQE
Sbjct: 1233 LVSEDGMSNVFLPGELIGLLRSERMGRALEEAICYRAVLLGITKASLNTQSFISEASFQE 1292

Query: 118  TARVLAKAALRGRIDWLKGLKENVVLGGMIP 26
            TARVLAKAALRGRIDWLKGLKENVVLGGMIP
Sbjct: 1293 TARVLAKAALRGRIDWLKGLKENVVLGGMIP 1323


>gb|ADX99121.1| RNA polymerase beta II subunit [Citharexylum ligustrinum]
          Length = 703

 Score =  164 bits (414), Expect = 9e-39
 Identities = 85/91 (93%), Positives = 87/91 (95%)
 Frame = -1

Query: 298 LVVLDWMSNVFLPGELIGLLRAERMGRALEEAICYRAVLLGITKASLNTQSFISEVSFQE 119
           LV  D MSNVFLPGELIGLLRAERMGRALEEAICYRA+LLGIT+ASLNTQSFISE SFQE
Sbjct: 589 LVSEDGMSNVFLPGELIGLLRAERMGRALEEAICYRALLLGITRASLNTQSFISEASFQE 648

Query: 118 TARVLAKAALRGRIDWLKGLKENVVLGGMIP 26
           TARVLAKAALRGRIDWLKGLKENVVLGGMIP
Sbjct: 649 TARVLAKAALRGRIDWLKGLKENVVLGGMIP 679


>gb|ADX99119.1| RNA polymerase beta II subunit [Citharexylum montevidense]
          Length = 287

 Score =  164 bits (414), Expect = 9e-39
 Identities = 85/91 (93%), Positives = 87/91 (95%)
 Frame = -1

Query: 298 LVVLDWMSNVFLPGELIGLLRAERMGRALEEAICYRAVLLGITKASLNTQSFISEVSFQE 119
           LV  D MSNVFLPGELIGLLRAERMGRALEEAICYRA+LLGIT+ASLNTQSFISE SFQE
Sbjct: 174 LVSEDGMSNVFLPGELIGLLRAERMGRALEEAICYRALLLGITRASLNTQSFISEASFQE 233

Query: 118 TARVLAKAALRGRIDWLKGLKENVVLGGMIP 26
           TARVLAKAALRGRIDWLKGLKENVVLGGMIP
Sbjct: 234 TARVLAKAALRGRIDWLKGLKENVVLGGMIP 264