BLASTX nr result

ID: Cnidium21_contig00036557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036557
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...   366   4e-99
dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]       365   5e-99
ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis ...   365   5e-99
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   360   3e-97
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   359   3e-97

>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi|297326163|gb|EFH56583.1|
            ATMRP4 [Arabidopsis lyrata subsp. lyrata]
          Length = 1525

 Score =  366 bits (939), Expect = 4e-99
 Identities = 178/269 (66%), Positives = 219/269 (81%)
 Frame = +1

Query: 1    QLHPIWMTPLQIGVALSLLYSSMGLSVIAATITVIGTMFFTLWITRKNNKFQYHIMRNKD 180
            QLH IW+ PLQ+ VAL LLY S+G SVI A I + G   F L  T++NN +Q+ +M N+D
Sbjct: 447  QLHAIWLMPLQVTVALVLLYGSLGASVITAVIGLTGVFVFILLGTQRNNGYQFSLMGNRD 506

Query: 181  SRMKATNEMLSNMRVIKFQAWEEHFNKRIQSFRDLEYGWLSKFMYAISTNMVVLWNIPMV 360
            SRMKATNEML+ MRVIKFQAWE HFNKRI  FRD+E+GWLSKF+Y+I+ N++VLW+ P++
Sbjct: 507  SRMKATNEMLNYMRVIKFQAWENHFNKRILKFRDMEFGWLSKFLYSIAANIIVLWSTPVL 566

Query: 361  MAVLTFGVALWLNVVRLDAGTVFTATTIFRILQEPIRTFPQALISVSQAMVSLGRLDGFM 540
            ++ LTF  AL L V +LDAGTVFT TTIF+ILQEPIRTFPQ++IS+SQAM+SLGRLD +M
Sbjct: 567  ISALTFATALALGV-KLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDSYM 625

Query: 541  TSKELENRSVERVLGCGGRTAVEVKGGNFSWDDKDGIANLKDVNITIKKGELAAIVGTVG 720
             SKEL   +VER LGC G TAVEV+ G+FSWDD+D    L D+N  +KKGEL AIVGTVG
Sbjct: 626  MSKELSGDAVERALGCDGSTAVEVRDGSFSWDDEDNEPALSDINFKVKKGELTAIVGTVG 685

Query: 721  SGKSSLLASILGEMHKLSGEVRVCGTTSY 807
            SGKSSLLAS+LGEMH++SG+VRVCG+T Y
Sbjct: 686  SGKSSLLASVLGEMHRISGQVRVCGSTGY 714


>dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]
          Length = 1516

 Score =  365 bits (938), Expect = 5e-99
 Identities = 178/269 (66%), Positives = 219/269 (81%)
 Frame = +1

Query: 1    QLHPIWMTPLQIGVALSLLYSSMGLSVIAATITVIGTMFFTLWITRKNNKFQYHIMRNKD 180
            QLH IW+ PLQ+ VAL LLY S+G SVI A I + G   F L  T++NN +Q+ +M N+D
Sbjct: 441  QLHAIWLMPLQVTVALVLLYGSLGASVITAVIGLTGVFVFILLGTQRNNGYQFSLMGNRD 500

Query: 181  SRMKATNEMLSNMRVIKFQAWEEHFNKRIQSFRDLEYGWLSKFMYAISTNMVVLWNIPMV 360
            SRMKATNEML+ MRVIKFQAWE HFNKRI  FRD+E+GWLSKF+Y+I+ N++VLW+ P++
Sbjct: 501  SRMKATNEMLNYMRVIKFQAWENHFNKRILKFRDMEFGWLSKFLYSIAGNIIVLWSTPVL 560

Query: 361  MAVLTFGVALWLNVVRLDAGTVFTATTIFRILQEPIRTFPQALISVSQAMVSLGRLDGFM 540
            ++ LTF  AL L V +LDAGTVFT TTIF+ILQEPIRTFPQ++IS+SQAM+SLGRLD +M
Sbjct: 561  ISALTFATALALGV-KLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDSYM 619

Query: 541  TSKELENRSVERVLGCGGRTAVEVKGGNFSWDDKDGIANLKDVNITIKKGELAAIVGTVG 720
             SKEL   +VER LGC G TAVEV+ G+FSWDD+D    L D+N  +KKGEL AIVGTVG
Sbjct: 620  MSKELSEDAVERALGCDGNTAVEVRDGSFSWDDEDNEPALSDINFKVKKGELTAIVGTVG 679

Query: 721  SGKSSLLASILGEMHKLSGEVRVCGTTSY 807
            SGKSSLLAS+LGEMH++SG+VRVCG+T Y
Sbjct: 680  SGKSSLLASVLGEMHRISGQVRVCGSTGY 708


>ref|NP_182301.1| ABC transporter C family member 4 [Arabidopsis thaliana]
            gi|90103510|sp|Q7DM58.2|AB4C_ARATH RecName: Full=ABC
            transporter C family member 4; Short=ABC transporter
            ABCC.4; Short=AtABCC4; AltName: Full=ATP-energized
            glutathione S-conjugate pump 4; AltName: Full=Glutathione
            S-conjugate-transporting ATPase 4; AltName:
            Full=Multidrug resistance-associated protein 4
            gi|7716583|gb|AAF68441.1|AF243509_1 MRP4 [Arabidopsis
            thaliana] gi|2959767|emb|CAA05625.1| AtMRP4 [Arabidopsis
            thaliana] gi|3738292|gb|AAC63634.1| glutathione-conjugate
            transporter AtMRP4 [Arabidopsis thaliana]
            gi|330255795|gb|AEC10889.1| ABC transporter C family
            member 4 [Arabidopsis thaliana]
          Length = 1516

 Score =  365 bits (938), Expect = 5e-99
 Identities = 178/269 (66%), Positives = 219/269 (81%)
 Frame = +1

Query: 1    QLHPIWMTPLQIGVALSLLYSSMGLSVIAATITVIGTMFFTLWITRKNNKFQYHIMRNKD 180
            QLH IW+ PLQ+ VAL LLY S+G SVI A I + G   F L  T++NN +Q+ +M N+D
Sbjct: 441  QLHAIWLMPLQVTVALVLLYGSLGASVITAVIGLTGVFVFILLGTQRNNGYQFSLMGNRD 500

Query: 181  SRMKATNEMLSNMRVIKFQAWEEHFNKRIQSFRDLEYGWLSKFMYAISTNMVVLWNIPMV 360
            SRMKATNEML+ MRVIKFQAWE HFNKRI  FRD+E+GWLSKF+Y+I+ N++VLW+ P++
Sbjct: 501  SRMKATNEMLNYMRVIKFQAWENHFNKRILKFRDMEFGWLSKFLYSIAGNIIVLWSTPVL 560

Query: 361  MAVLTFGVALWLNVVRLDAGTVFTATTIFRILQEPIRTFPQALISVSQAMVSLGRLDGFM 540
            ++ LTF  AL L V +LDAGTVFT TTIF+ILQEPIRTFPQ++IS+SQAM+SLGRLD +M
Sbjct: 561  ISALTFATALALGV-KLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDSYM 619

Query: 541  TSKELENRSVERVLGCGGRTAVEVKGGNFSWDDKDGIANLKDVNITIKKGELAAIVGTVG 720
             SKEL   +VER LGC G TAVEV+ G+FSWDD+D    L D+N  +KKGEL AIVGTVG
Sbjct: 620  MSKELSEDAVERALGCDGNTAVEVRDGSFSWDDEDNEPALSDINFKVKKGELTAIVGTVG 679

Query: 721  SGKSSLLASILGEMHKLSGEVRVCGTTSY 807
            SGKSSLLAS+LGEMH++SG+VRVCG+T Y
Sbjct: 680  SGKSSLLASVLGEMHRISGQVRVCGSTGY 708


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  360 bits (923), Expect = 3e-97
 Identities = 178/269 (66%), Positives = 223/269 (82%)
 Frame = +1

Query: 1    QLHPIWMTPLQIGVALSLLYSSMGLSVIAATITVIGTMFFTLWITRKNNKFQYHIMRNKD 180
            QLH IW+ PLQ+ VAL LLY+++G+SVIAA I +   M F L+ TR+NN+FQ ++M N+D
Sbjct: 441  QLHAIWLMPLQVTVALVLLYNALGVSVIAALIGIACVMVFALYGTRRNNRFQKNLMMNRD 500

Query: 181  SRMKATNEMLSNMRVIKFQAWEEHFNKRIQSFRDLEYGWLSKFMYAISTNMVVLWNIPMV 360
            SRMKATNEML+ MRVIKFQAWEEHFNKRIQ+FR+ E+ WLSKFMY++S N++V+W  P++
Sbjct: 501  SRMKATNEMLNYMRVIKFQAWEEHFNKRIQNFRESEFEWLSKFMYSVSGNIIVMWCTPLL 560

Query: 361  MAVLTFGVALWLNVVRLDAGTVFTATTIFRILQEPIRTFPQALISVSQAMVSLGRLDGFM 540
            ++ +TFG AL   V  LDAGTVFT T+IF+ILQ+PIR+FPQ++IS SQAM+SL RLD +M
Sbjct: 561  ISTVTFGTALLFGVP-LDAGTVFTTTSIFKILQDPIRSFPQSMISFSQAMISLERLDRYM 619

Query: 541  TSKELENRSVERVLGCGGRTAVEVKGGNFSWDDKDGIANLKDVNITIKKGELAAIVGTVG 720
             SKEL  +SVERV GC GR AVE+K G+FSWDD+     LK++N  IKKGEL AIVGTVG
Sbjct: 620  LSKELVEQSVERVDGCDGRIAVEIKDGSFSWDDESEDEVLKNINFEIKKGELTAIVGTVG 679

Query: 721  SGKSSLLASILGEMHKLSGEVRVCGTTSY 807
            SGKSSLLAS+LGEMHK+SG+VRVCGTT+Y
Sbjct: 680  SGKSSLLASVLGEMHKISGKVRVCGTTAY 708


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1507

 Score =  359 bits (922), Expect = 3e-97
 Identities = 175/269 (65%), Positives = 220/269 (81%)
 Frame = +1

Query: 1    QLHPIWMTPLQIGVALSLLYSSMGLSVIAATITVIGTMFFTLWITRKNNKFQYHIMRNKD 180
            QLH IW+ PLQ+GV L+LLY+++G S + A I  +G + F ++  ++NNKFQ ++M N+D
Sbjct: 442  QLHSIWLMPLQVGVGLALLYNALGTSAVTALIGTLGVIVFAVFSNKRNNKFQRNVMINRD 501

Query: 181  SRMKATNEMLSNMRVIKFQAWEEHFNKRIQSFRDLEYGWLSKFMYAISTNMVVLWNIPMV 360
            SRMKATNEML+ MRVIKFQAWE+HFNKRIQ FRD E+GW+SKF+Y+IS N +V+W+ P++
Sbjct: 502  SRMKATNEMLNYMRVIKFQAWEDHFNKRIQDFRDSEFGWISKFLYSISINTIVMWSTPLL 561

Query: 361  MAVLTFGVALWLNVVRLDAGTVFTATTIFRILQEPIRTFPQALISVSQAMVSLGRLDGFM 540
            ++ LTFG AL L V  LDAGTVFT T+IF++LQEPIR FPQA+IS+SQAMVSL RLD +M
Sbjct: 562  VSTLTFGTALLLGVP-LDAGTVFTTTSIFKMLQEPIRVFPQAMISLSQAMVSLARLDCYM 620

Query: 541  TSKELENRSVERVLGCGGRTAVEVKGGNFSWDDKDGIANLKDVNITIKKGELAAIVGTVG 720
             SKEL   SVERV  C GR AVEVKGG FSWDD+     L ++N+ IKKG+L AIVGTVG
Sbjct: 621  LSKELVEESVERVDACDGRIAVEVKGGIFSWDDEAKGEVLNNINLEIKKGKLTAIVGTVG 680

Query: 721  SGKSSLLASILGEMHKLSGEVRVCGTTSY 807
            SGKSSLLASILGEMHK+SG++R+CGTT+Y
Sbjct: 681  SGKSSLLASILGEMHKISGKIRICGTTAY 709


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