BLASTX nr result

ID: Cnidium21_contig00036556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036556
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   119   6e-25
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   3e-23
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   113   4e-23
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...   110   3e-22
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...   109   6e-22

>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  119 bits (299), Expect = 6e-25
 Identities = 75/241 (31%), Positives = 119/241 (49%), Gaps = 6/241 (2%)
 Frame = -2

Query: 724  KHNKSFQFYNYMSSLEGFLPAVRKGWDEVWFGDPMAILVKKLKNVKRELITLSKAHGNLH 545
            K+NK+F+F N +  +EG+   V+  W     G PM  L  KLK +++++   SK   NL 
Sbjct: 579  KNNKNFRFSNCLIEMEGYNDMVKASWSRPTRGSPMVRLWNKLKRLQQDMRRFSKPLSNLK 638

Query: 544  SNVSRARADLQQIQEQLTTVPSNAELITSEKSASLHLEKVLFEEESLLLQKSRVKWLSLG 365
             N+ +AR DLQ  QE L     N + I   +  +  +  +   EE +L+Q+++V W+  G
Sbjct: 639  QNLIKAREDLQFAQENLRNNNMNGDRIDRVRQLTEEVINLNELEEKMLMQRAKVDWIRKG 698

Query: 364  DGNNSFFFNQTRANWECNKMLAIEDAEGNLVTGQSNVAKVAVDFFQNSLGTSQALQECNL 185
            DGNNSF                    +G L+  QS +    +DF++  +GT    ++  L
Sbjct: 699  DGNNSF------------------KTDGTLLENQSEIEDEIMDFYKKLMGT----EDSQL 736

Query: 184  DEVDCDFISEHQASNLE------APITRDLIFRTLNAMKKNKAPGPDGFSVEFFLAAWEI 23
              +D D +   +  N+E      + IT   I R L  +  +K+PG DGF  +FF A+W I
Sbjct: 737  HHIDIDAMRNGKQVNMEQRRYLVSNITEQDIERALKGIGDDKSPGIDGFGAKFFKASWCI 796

Query: 22   V 20
            V
Sbjct: 797  V 797


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  114 bits (284), Expect = 3e-23
 Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 3/249 (1%)
 Frame = -2

Query: 757 PILLTVPMQLQKHNKSFQFYNYMSSLEGFLPAVRKGWDEVWFGDPMAILVKKLKNVKREL 578
           P++  +  Q  +  + F+F N+++   GF+  V++ W        M  +  +L+ VKR L
Sbjct: 229 PLIFNLATQHDEGGRPFKFLNFLADQNGFVEVVKEAWGSANHRFKMKNIWVRLQAVKRAL 288

Query: 577 ITL-SKAHGNLHSNVSRARADLQQIQEQLTTVPSNAELITSEKSASLHLEKVLFEEESLL 401
            +  SK     H  V   R  L  +Q  L  V   +EL   EK     L K    +ES+L
Sbjct: 289 KSFHSKKFSKAHCQVEELRRKLAAVQA-LPEVSQVSELQEEEKDLIAQLRKWSTIDESIL 347

Query: 400 LQKSRVKWLSLGDGNNSFFFNQTRANWECNKMLAIEDAEGNLVTGQSNVAKVAVDFFQNS 221
            QKSR++WLSLGD N+ FFF   +     NK++ +++  G+ +T  + +     +F++  
Sbjct: 348 KQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEICNFYRRL 407

Query: 220 LGTSQA-LQECNLDEVDCDF-ISEHQASNLEAPITRDLIFRTLNAMKKNKAPGPDGFSVE 47
           LGTS + L+  +L  V     +S    + L  PIT   I + L  +   KAPG DGF+  
Sbjct: 408 LGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDGFNSV 467

Query: 46  FFLAAWEIV 20
           FF  +W ++
Sbjct: 468 FFKKSWLVI 476


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  113 bits (283), Expect = 4e-23
 Identities = 81/256 (31%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
 Frame = -2

Query: 757 PILLTVPMQLQKHNKSFQFYNYMSSLEGFLPAVRKGWDEVWF-GDPMAILVKKLKNVKRE 581
           P  + +  Q    NK F+  N++     F+  +R  WD + + G  M  L KK K +K  
Sbjct: 231 PSCVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGT 290

Query: 580 LITLSKAH-GNLHSNVSRARADLQQIQEQLTTVPSNAELITSEKSASLHLEKVLFEEESL 404
           + T ++ H   L   V +A  +L+  Q  L   PS+  L   EK A     ++   EE  
Sbjct: 291 IRTFNREHYSGLEKRVVQAAQNLKTCQNNLLAAPSSY-LAGLEKEAHRSWAELALAEERF 349

Query: 403 LLQKSRVKWLSLGDGNNSFFFNQTRANWECNKMLAIEDAEGNLVTGQSNVAKVAVDFFQN 224
           L QKSRV WL  GD N +FF     A    N++  + D  G  +     +    VDFF+ 
Sbjct: 350 LCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKE 409

Query: 223 SLGTSQAL-------QECNLDEVDCDFISEHQASNLEAPITRDLIFRTLNAMKKNKAPGP 65
             G+S  L       Q  +L    CD   E+    LEA ++   I     A+  NK+PGP
Sbjct: 410 LFGSSSHLISAEGISQINSLTRFKCD---ENTRQLLEAEVSEADIKSEFFALPSNKSPGP 466

Query: 64  DGFSVEFFLAAWEIVG 17
           DG++ EFF   W IVG
Sbjct: 467 DGYTSEFFKKTWSIVG 482


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score =  110 bits (276), Expect = 3e-22
 Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 6/225 (2%)
 Frame = -2

Query: 676  GFLPAVRKGWDEVWFGDPMAILVKKLKNVKRELITLSKAHGNLHSNVSRARADLQQIQEQ 497
            G+   V+  W     G PM  L  KLK +++++   SK   NL  N+ +AR  LQ  QE 
Sbjct: 460  GYNDMVKASWSRPTRGSPMVRLWNKLKRLQQDMRRFSKPLSNLKQNLIKAREYLQFAQEN 519

Query: 496  LTTVPSNAELITSEKSASLHLEKVLFEEESLLLQKSRVKWLSLGDGNNSFFFNQTRANWE 317
            L     N   I   +  +  +  +   EE +L+Q+++V W+  GDGNNSFF    ++   
Sbjct: 520  LRNNNMNGHRIDRVRKLTKDVINLNEMEEKMLMQRAKVDWIRKGDGNNSFFHAIIKSRNN 579

Query: 316  CNKMLAIEDAEGNLVTGQSNVAKVAVDFFQNSLGTSQALQECNLDEVDCDFISEHQASNL 137
               +  ++  +G L+  QS +    +DF++  +GT    ++  L  +D D +   +  N+
Sbjct: 580  RRNIYMLQKTDGTLLENQSEIEDEIMDFYKKLMGT----EDSQLHHIDIDAMRNGKQVNM 635

Query: 136  E------APITRDLIFRTLNAMKKNKAPGPDGFSVEFFLAAWEIV 20
            E      + IT   I R L  +  +K+PG DGF  +FF A+W IV
Sbjct: 636  EQRRYLVSNITEQDIERALKGIGDDKSPGIDGFGAKFFKASWCIV 680


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  109 bits (273), Expect = 6e-22
 Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
 Frame = -2

Query: 631 GDPMAILVKKLKNVKRELITLSKAH-GNLHSNVSRARADLQQIQEQLTTVPSNAELITSE 455
           G PM  L   LK +K+EL   + AH  N+   V  A+ ++ + Q+ L T   N  L   E
Sbjct: 242 GCPMYQLCCNLKKLKQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRE 301

Query: 454 KSASLHLEKVLFEEESLLLQKSRVKWLSLGDGNNSFFFNQTRANWECNKMLAIEDAEGNL 275
           +         +  EES   QK+R++WLSLGD N S+F          NK+L++   +G +
Sbjct: 302 RDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEV 361

Query: 274 VTGQSNVAKVAVDFFQNSLGTSQALQECNLDEVDCDF---ISEHQASNLEAPITRDLIFR 104
           V G   V    + +F   LG  Q  +  N + ++      +S  Q   L   +TR  I  
Sbjct: 362 VEGHEAVKSEVIAYFHRVLGVDQMPRVLNEEVMESAINLKLSSTQQHVLAQVVTRKEIKH 421

Query: 103 TLNAMKKNKAPGPDGFSVEFFLAAWEIVGD 14
            + ++K NKAPG DGF+  FF   W IVG+
Sbjct: 422 AMFSLKNNKAPGLDGFNAGFFKRMWHIVGE 451


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