BLASTX nr result

ID: Cnidium21_contig00036516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036516
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321872.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
emb|CBI24465.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002866475.1| hypothetical protein ARALYDRAFT_919470 [Arab...    55   8e-06

>ref|XP_002321872.1| predicted protein [Populus trichocarpa] gi|222868868|gb|EEF05999.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
 Frame = +1

Query: 112 KKPPQTMDLMRNKQEESFVRSALTNGRASQISDSKCXXXXXXXXXXXXXXEIKRQKQ--- 282
           KKP +T  ++R KQEE FV S  T+ R + I+D KC               +   K+   
Sbjct: 426 KKPLKTSHIIRTKQEEPFVSS--TSARETNITDKKCKKTPLSNDLNISLPTLLPVKKDPT 483

Query: 283 -----FYDSEASDPSSSKKNTQMLSCNLSQSYKQEL-----------NDQNSLMG----- 399
                    + S+ +   K    LS   SQSYKQ             ND  S  G     
Sbjct: 484 PPATKIPQKQVSNAAQESKWCSQLSSCSSQSYKQPQATRRLDARENNNDDRSHNGVATNI 543

Query: 400 -------AEQLTDYISRILNCTAIFHQTPISIFTFNSPSYPLDPSIFH 522
                  A++  +YISRIL  T I   TP+S   + SPS+PLDPS F+
Sbjct: 544 ITTGDGAAQEEYEYISRILKRTGIDKDTPVSFTRWFSPSHPLDPSTFY 591


>emb|CBI24465.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
 Frame = +1

Query: 103 SKFKKPPQTMDLMRNKQEESFVRSALTNGRASQISDSKCXXXXXXXXXXXXXXE----IK 270
           ++ KK P+T + +RNKQEE FVR +    +    SD KC                    K
Sbjct: 359 ARLKKSPKTSETIRNKQEEPFVRPS--TAKNPNHSDKKCKKTPLSTDLLNIAVPNLVPFK 416

Query: 271 R----------QKQFYDSEASD-PSSSKKNTQMLSCNLSQSYKQELNDQNSLMGAEQLTD 417
           +          QKQ Y+ EA   P++ +K ++  +   +Q+            GA +   
Sbjct: 417 KEPSPPTTKIPQKQVYEEEARHMPAAREKESEEKAMTTTQA-----------QGAAEF-Q 464

Query: 418 YISRILNCTAIFHQTPISIFTFNSPSYPLDPSIFHK 525
           YISRIL  T +   TP+S   F SPS PL PSIFH+
Sbjct: 465 YISRILKRTGLDRDTPVSSIQFFSPSLPLHPSIFHQ 500


>ref|XP_002866475.1| hypothetical protein ARALYDRAFT_919470 [Arabidopsis lyrata subsp.
           lyrata] gi|297312310|gb|EFH42734.1| hypothetical protein
           ARALYDRAFT_919470 [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 54/173 (31%), Positives = 72/173 (41%), Gaps = 7/173 (4%)
 Frame = +1

Query: 25  ERNQKQKSSLVNSKLVIHGDDNMKCSSKFKKPPQTMDLMRNKQEESFVRSALTNGRAS-- 198
           E+ Q+ K     S       +N K  S+  KPPQTM      QEE FVRS LT+   +  
Sbjct: 369 EQGQQVKEKQRESTKKCKKPENFK--SRLVKPPQTM------QEEPFVRSPLTSNNKNNN 420

Query: 199 -----QISDSKCXXXXXXXXXXXXXXEIKRQKQFYDSEASDPSSSKKNTQMLSCNLSQSY 363
                Q   S C               +   K+  DS     SS+ K  +  +     S 
Sbjct: 421 GLLLIQGDKSSCKKTPLSINHLINFTSVPTTKK-KDSSLHHKSSNLKLRETQTPRNRASS 479

Query: 364 KQELNDQNSLMGAEQLTDYISRILNCTAIFHQTPISIFTFNSPSYPLDPSIFH 522
           +        + G E   +YI+R L  T I   TPIS   + SPS+PLDPSIF+
Sbjct: 480 EIPSFPSPPIAGGE--LEYITRTLRRTGIDRDTPISYAKWFSPSHPLDPSIFY 530


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