BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036504
         (1596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   252   2e-64
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   252   2e-64
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   247   6e-63
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi...   244   6e-62
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              244   6e-62

>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial [Vitis vinifera]
          Length = 383

 Score =  252 bits (643), Expect = 2e-64
 Identities = 131/332 (39%), Positives = 198/332 (59%), Gaps = 9/332 (2%)
 Frame = +3

Query: 348  DKFR----IYRANNYVRRLAAADQHSLIEEAVKHQEQLGDVNNVGLRTKLMALYGRGGMF 515
            D+FR    IY     VRRLA+A +   IEE ++ Q++  D++  G   +L++LYG+ GMF
Sbjct: 53   DRFRTKTGIYEET--VRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMF 110

Query: 516  DNALQLFDEMPEKSCK----SFNGLLAASMYAKKFDMTEQLFRELPEKYGIEVDLMSYNI 683
            D+A ++FDEMP++ C+    SFN LL A +++KKFD  E  F ELP K  +E DL+SYNI
Sbjct: 111  DHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNI 170

Query: 684  LARSYCQSGSMDLALGVLVEMESNGVEPDLVTFNTLLVGLYRDKKLVEAEKLWSIMESKN 863
            + +  C  GSMD A+G+L EME   +EPDL+TFNTLL G Y   + ++ EK+W  ME KN
Sbjct: 171  VIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKN 230

Query: 864  FGLTVRSYDPKIKYFIEND-QIEEAVIVFDEMMSKGVKPDRLSYYLFIKGYSDKGNLEET 1040
                +RSY+ K+   + ++ ++ E + + +EM +KG+KPD  S+   IKG+ + G ++E 
Sbjct: 231  ILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEA 290

Query: 1041 KRWYDKLSLDMVRPDRRIIKTVLPLVCEEGDLDYAIKLANDSVKWRCIVNXXXXXXXXXX 1220
              WY K+  +   PD+    T++PL CE+G  D A +L  +    +C+V+          
Sbjct: 291  TNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDG 350

Query: 1221 XXXASKIDEAKDLIALTESLRYYNKNLKLPAE 1316
                 K+ EAK L+ L  S  Y   NLK+P +
Sbjct: 351  LVKGGKVVEAKKLVQLGNSNSYRRYNLKIPTD 382


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
            mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  252 bits (643), Expect = 2e-64
 Identities = 131/331 (39%), Positives = 193/331 (58%), Gaps = 8/331 (2%)
 Frame = +3

Query: 348  DKFR----IYRANNYVRRLAAADQHSLIEEAVKHQEQLGDVNNVGLRTKLMALYGRGGMF 515
            D+FR    IY     VRRLA+A +   IEE ++ Q++  D++  G   +L+ LYG+ GMF
Sbjct: 53   DRFRTKTGIYEET--VRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLITLYGKSGMF 110

Query: 516  DNALQLFDEMPEKSCK----SFNGLLAASMYAKKFDMTEQLFRELPEKYGIEVDLMSYNI 683
            D+A ++FDEMP++ C+    SFN LL A + +KKFD  E  F ELP K  +E DL+SYNI
Sbjct: 111  DHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNI 170

Query: 684  LARSYCQSGSMDLALGVLVEMESNGVEPDLVTFNTLLVGLYRDKKLVEAEKLWSIMESKN 863
            +    C  GSMD A+G+L EME   +EPDL+TFNTLL G Y   + ++ EK+W  ME KN
Sbjct: 171  VINGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKN 230

Query: 864  FGLTVRSYDPKIKYFIENDQIEEAVIVFDEMMSKGVKPDRLSYYLFIKGYSDKGNLEETK 1043
                +RSY+ K+   +   ++ E + + +EM +KG+KPD  S+   IKG+ + G ++E  
Sbjct: 231  ILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEAT 290

Query: 1044 RWYDKLSLDMVRPDRRIIKTVLPLVCEEGDLDYAIKLANDSVKWRCIVNXXXXXXXXXXX 1223
             WY K+  +   PD+    T++PL CE+G  D A +L  +    +C+V+           
Sbjct: 291  NWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGL 350

Query: 1224 XXASKIDEAKDLIALTESLRYYNKNLKLPAE 1316
                K+ EAK L+ L  S  Y   NLK+P +
Sbjct: 351  VKGGKVVEAKKLVQLGNSNSYRRYNLKIPTD 381


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  247 bits (631), Expect = 6e-63
 Identities = 130/332 (39%), Positives = 196/332 (59%), Gaps = 9/332 (2%)
 Frame = +3

Query: 348  DKFR----IYRANNYVRRLAAADQHSLIEEAVKHQEQLGDVNNVGLRTKLMALYGRGGMF 515
            D+FR    IY     VRRLA+A +   IEE ++ Q++  D++  G   +L++LYG+ GMF
Sbjct: 53   DRFRTKTGIYEET--VRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMF 110

Query: 516  DNALQLFDEMPEKSCK----SFNGLLAASMYAKKFDMTEQLFRELPEKYGIEVDLMSYNI 683
            D+A ++FDEMP++ C+    SFN LL A + +KKFD  E  F ELP K  +E DL+SYNI
Sbjct: 111  DHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNI 170

Query: 684  LARSYCQSGSMDLALGVLVEMESNGVEPDLVTFNTLLVGLYRDKKLVEAEKLWSIMESKN 863
            + +  C  GSMD A+G+L EME   +EPDL+TFNTLL   Y   + ++ EK+W  ME KN
Sbjct: 171  VIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKN 230

Query: 864  FGLTVRSYDPKIKYFIEND-QIEEAVIVFDEMMSKGVKPDRLSYYLFIKGYSDKGNLEET 1040
                +RSY+ K+   + ++ ++ E + + +EM +KG+KPD  S+   IKG+ + G ++E 
Sbjct: 231  ILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEA 290

Query: 1041 KRWYDKLSLDMVRPDRRIIKTVLPLVCEEGDLDYAIKLANDSVKWRCIVNXXXXXXXXXX 1220
              WY K+  +   PD+    T++PL CE+G  D A +L  +    +C+V+          
Sbjct: 291  TNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDG 350

Query: 1221 XXXASKIDEAKDLIALTESLRYYNKNLKLPAE 1316
                 K+ EAK L+ L  S  Y   NLK+P +
Sbjct: 351  LVKGGKVVEAKKLVQLGNSNSYRRYNLKIPTD 382


>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
            mitochondrial-like [Vitis vinifera]
          Length = 379

 Score =  244 bits (622), Expect = 6e-62
 Identities = 126/316 (39%), Positives = 194/316 (61%), Gaps = 4/316 (1%)
 Frame = +3

Query: 381  VRRLAAADQHSLIEEAVKHQEQLGDVNNVGLRTKLMALYGRGGMFDNALQLFDEMPEKSC 560
            V  LA A + S IE+ ++HQEQ  +++      +LM LYG  GMFD+A +LFDE+P+ +C
Sbjct: 64   VLTLAKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAHKLFDELPKLNC 123

Query: 561  K----SFNGLLAASMYAKKFDMTEQLFRELPEKYGIEVDLMSYNILARSYCQSGSMDLAL 728
            +    SFN LL+A + +KKFD  +  F+ELP   GI  D++SYNIL  ++C+ GS+D AL
Sbjct: 124  ERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLDSAL 183

Query: 729  GVLVEMESNGVEPDLVTFNTLLVGLYRDKKLVEAEKLWSIMESKNFGLTVRSYDPKIKYF 908
             VL EME  G+EPDL+TFNTLL   Y++    + EK+W +M+  N    VRSY+ K++  
Sbjct: 184  SVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRGV 243

Query: 909  IENDQIEEAVIVFDEMMSKGVKPDRLSYYLFIKGYSDKGNLEETKRWYDKLSLDMVRPDR 1088
            I  +++ EAV + DEM + G+KPD  +    +KG+ + GNLEE KRWY +++ + + P R
Sbjct: 244  ISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVR 303

Query: 1089 RIIKTVLPLVCEEGDLDYAIKLANDSVKWRCIVNXXXXXXXXXXXXXASKIDEAKDLIAL 1268
                T++P + E+GD + A +L  +    R ++               SKI+EA +L+ L
Sbjct: 304  ATYMTLIPFLVEKGDFEMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELVEL 363

Query: 1269 TESLRYYNKNLKLPAE 1316
             E L+ +   L+LP++
Sbjct: 364  -EKLKKFRITLELPSD 378


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  244 bits (622), Expect = 6e-62
 Identities = 125/318 (39%), Positives = 194/318 (61%), Gaps = 8/318 (2%)
 Frame = +3

Query: 348  DKFR----IYRANNYVRRLAAADQHSLIEEAVKHQEQLGDVNNVGLRTKLMALYGRGGMF 515
            D+FR    IY     VRRLA+A +   IEE ++ Q++  D++  G   +L++LYG+ GMF
Sbjct: 61   DRFRTKTGIYEET--VRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMF 118

Query: 516  DNALQLFDEMPEKSCK----SFNGLLAASMYAKKFDMTEQLFRELPEKYGIEVDLMSYNI 683
            D+A ++FDEMP++ C+    SFN LL A +++KKFD  +  F+ELP   G+  D++SYNI
Sbjct: 119  DHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNI 178

Query: 684  LARSYCQSGSMDLALGVLVEMESNGVEPDLVTFNTLLVGLYRDKKLVEAEKLWSIMESKN 863
            +  ++C+ GS+D AL VL EME  G+EPDL+TFNTLL   Y++    + EK+W +M+  N
Sbjct: 179  IVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNN 238

Query: 864  FGLTVRSYDPKIKYFIENDQIEEAVIVFDEMMSKGVKPDRLSYYLFIKGYSDKGNLEETK 1043
                VRSY+ K++  I  +++ EAV + DEM + G+KPD  +    +KG+ + GNLEE K
Sbjct: 239  VAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAK 298

Query: 1044 RWYDKLSLDMVRPDRRIIKTVLPLVCEEGDLDYAIKLANDSVKWRCIVNXXXXXXXXXXX 1223
            RWY +++ + + P R    T++P + E+GD D A +L  +    R ++            
Sbjct: 299  RWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGL 358

Query: 1224 XXASKIDEAKDLIALTES 1277
               SKI+EA +L  +  S
Sbjct: 359  VKESKIEEATELFLIFRS 376