BLASTX nr result

ID: Cnidium21_contig00036495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036495
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]   187   8e-46
dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]                         183   1e-44
ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
ref|NP_199912.2| pentatricopeptide repeat-containing protein [Ar...   176   1e-42

>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score =  187 bits (475), Expect = 8e-46
 Identities = 86/115 (74%), Positives = 105/115 (91%)
 Frame = -3

Query: 507 SDPETVAIYKVLERLISRTRMEGFIPSTELVLMDIAEEEKEQNLNYHSEKLAVAYAILKS 328
           S PET AIYKVLE LI RT++EGF+P+T+LVLMD+++EE+E+NLN HSEKLA+AY ILK+
Sbjct: 409 SHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKT 468

Query: 327 GPGTEIQVSKNLRTCIDCHYWMKIVSRILNRVIIVRDRIRFHRFEGGLCTCGDFW 163
            PGTEI+VSKNLRTC DCH WMKI+SR+L+RVIIVRDRIRFH+FEGGLC+C D+W
Sbjct: 469 SPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 523


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score =  187 bits (475), Expect = 8e-46
 Identities = 86/115 (74%), Positives = 105/115 (91%)
 Frame = -3

Query: 507 SDPETVAIYKVLERLISRTRMEGFIPSTELVLMDIAEEEKEQNLNYHSEKLAVAYAILKS 328
           S PET AIYKVLE LI RT++EGF+P+T+LVLMD+++EE+E+NLN HSEKLA+AY ILK+
Sbjct: 448 SHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKT 507

Query: 327 GPGTEIQVSKNLRTCIDCHYWMKIVSRILNRVIIVRDRIRFHRFEGGLCTCGDFW 163
            PGTEI+VSKNLRTC DCH WMKI+SR+L+RVIIVRDRIRFH+FEGGLC+C D+W
Sbjct: 508 SPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562


>dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
          Length = 514

 Score =  183 bits (465), Expect = 1e-44
 Identities = 81/115 (70%), Positives = 102/115 (88%)
 Frame = -3

Query: 507 SDPETVAIYKVLERLISRTRMEGFIPSTELVLMDIAEEEKEQNLNYHSEKLAVAYAILKS 328
           S PET A+YK+LE LI RT++EGF+PSTELV+MD++EEEKE+NL +HSEKLA+AY ILK+
Sbjct: 400 SHPETEALYKILEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKT 459

Query: 327 GPGTEIQVSKNLRTCIDCHYWMKIVSRILNRVIIVRDRIRFHRFEGGLCTCGDFW 163
            PGTEI++ KNLR C DCH W+K+VS +L+RVII+RDRIRFHRFEGG C+CGD+W
Sbjct: 460 SPGTEIRIYKNLRICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514


>ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Glycine max]
          Length = 569

 Score =  177 bits (449), Expect = 8e-43
 Identities = 79/115 (68%), Positives = 101/115 (87%)
 Frame = -3

Query: 507 SDPETVAIYKVLERLISRTRMEGFIPSTELVLMDIAEEEKEQNLNYHSEKLAVAYAILKS 328
           S PE  +IY+VLE LI R ++EGF P T+LVLMD++EEEKE+NL +HSEKLA+AYA+LK+
Sbjct: 455 SHPEMKSIYRVLEGLIQRAKLEGFTPLTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKT 514

Query: 327 GPGTEIQVSKNLRTCIDCHYWMKIVSRILNRVIIVRDRIRFHRFEGGLCTCGDFW 163
            PGT+I++SKNLR C+DCH W+KIVS+ILNR IIVRDRIRFH+FEGG+C+C D+W
Sbjct: 515 SPGTKIRISKNLRICLDCHNWIKIVSKILNRKIIVRDRIRFHQFEGGVCSCKDYW 569


>ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g50990 gi|332008636|gb|AED96019.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 534

 Score =  176 bits (447), Expect = 1e-42
 Identities = 79/112 (70%), Positives = 97/112 (86%)
 Frame = -3

Query: 498 ETVAIYKVLERLISRTRMEGFIPSTELVLMDIAEEEKEQNLNYHSEKLAVAYAILKSGPG 319
           ET AIYKVLE LI +T+ +GF+  T+LVLMD++EEEKE+NLNYHSEKLA+AY ILKS PG
Sbjct: 423 ETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPG 482

Query: 318 TEIQVSKNLRTCIDCHYWMKIVSRILNRVIIVRDRIRFHRFEGGLCTCGDFW 163
           TEI++ KN+R C DCH W+K VS++LNRVII+RDRIRFHRFE GLC+C D+W
Sbjct: 483 TEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534


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