BLASTX nr result

ID: Cnidium21_contig00036482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036482
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313198.1| predicted protein [Populus trichocarpa] gi|2...    46   1e-09
ref|XP_002270964.1| PREDICTED: agamous-like MADS-box protein AGL...    44   2e-09
emb|CBI25112.3| unnamed protein product [Vitis vinifera]               43   7e-09
ref|XP_002522084.1| mads box protein, putative [Ricinus communis...    41   6e-08
ref|XP_002530713.1| mads box protein, putative [Ricinus communis...    40   4e-07

>ref|XP_002313198.1| predicted protein [Populus trichocarpa] gi|222849606|gb|EEE87153.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 46.2 bits (108), Expect(2) = 1e-09
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
 Frame = +1

Query: 151 AEKKVGEMLEKVVEMRGGGRRV--WDKEVEKLGFGEIEEVNVAMEEMKKRIVLQQRRILS 324
           AEK+  E L    +MR   R    W+  VE+LG  E+E++  A+EE+KKR+  Q  +IL 
Sbjct: 116 AEKRHSETLN---QMRKSSRSQCWWEAPVEELGLQELEQLRDALEELKKRLTKQTNKILI 172

Query: 325 EASN 336
           E+SN
Sbjct: 173 ESSN 176



 Score = 41.2 bits (95), Expect(2) = 1e-09
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 14  CNADVAVIAFSLAGNAYAFGDPSVPSVLDRYYKYKAVPVS 133
           C  D+A++ FS A  A++FG P V S++DR+    A P S
Sbjct: 46  CGVDIAILVFSPAHKAFSFGHPDVDSIMDRFLTRNAPPQS 85


>ref|XP_002270964.1| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
           gi|147772544|emb|CAN63001.1| hypothetical protein
           VITISV_024203 [Vitis vinifera]
          Length = 214

 Score = 43.9 bits (102), Expect(2) = 2e-09
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = +2

Query: 14  CNADVAVIAFSLAGNAYAFGDPSVPSVLDRYYKYKAVP 127
           C A+VA+I FS AG  ++FG P V S++DR++    +P
Sbjct: 45  CGANVAIIVFSPAGKVFSFGHPDVESIVDRFFTCNPIP 82



 Score = 43.1 bits (100), Expect(2) = 2e-09
 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = +1

Query: 151 AEKKVGEMLEKVVEMRGGGRRV--WDKEVEKLGFGEIEEVNVAMEEMKKRIVLQQRRILS 324
           AEKK GE+L    +MR   +    W+  + +L   E+E++ V+MEE+KK ++ Q  ++L 
Sbjct: 114 AEKKRGEILS---QMRRASQTQCWWEAPINELSMPELEQLKVSMEELKKVVLSQGDKLLM 170

Query: 325 EASN 336
           EA+N
Sbjct: 171 EAAN 174


>emb|CBI25112.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 43.1 bits (100), Expect(2) = 7e-09
 Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = +1

Query: 151 AEKKVGEMLEKVVEMRGGGRRV--WDKEVEKLGFGEIEEVNVAMEEMKKRIVLQQRRILS 324
           AEKK GE+L    +MR   +    W+  + +L   E+E++ V+MEE+KK ++ Q  ++L 
Sbjct: 94  AEKKRGEILS---QMRRASQTQCWWEAPINELSMPELEQLKVSMEELKKVVLSQGDKLLM 150

Query: 325 EASN 336
           EA+N
Sbjct: 151 EAAN 154



 Score = 41.6 bits (96), Expect(2) = 7e-09
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = +2

Query: 14  CNADVAVIAFSLAGNAYAFGDPSVPSVLDRYY 109
           C A+VA+I FS AG  ++FG P V S++DR++
Sbjct: 45  CGANVAIIVFSPAGKVFSFGHPDVESIVDRFF 76


>ref|XP_002522084.1| mads box protein, putative [Ricinus communis]
           gi|223538683|gb|EEF40284.1| mads box protein, putative
           [Ricinus communis]
          Length = 226

 Score = 41.2 bits (95), Expect(2) = 6e-08
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = +2

Query: 14  CNADVAVIAFSLAGNAYAFGDPSVPSVLDRYYKYKAVPVS 133
           C  ++A++ FS A  A++FG P V SVLDR+     +P S
Sbjct: 64  CGVEIAILVFSPANKAFSFGHPEVESVLDRFLARHPLPTS 103



 Score = 40.4 bits (93), Expect(2) = 6e-08
 Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = +1

Query: 154 EKKVGEMLEKVVEMRGGGRRV--WDKEVEKLGFGEIEEVNVAMEEMKKRIVLQQRRIL 321
           EKK GE+L+++   R   + +  W+  +++LG  E+E++  A+EE+KK +  Q  +IL
Sbjct: 135 EKKKGELLDQI---RKSSQNMCWWEAPIDELGMHELEQLRFALEELKKNVTKQISKIL 189


>ref|XP_002530713.1| mads box protein, putative [Ricinus communis]
           gi|223529727|gb|EEF31667.1| mads box protein, putative
           [Ricinus communis]
          Length = 183

 Score = 40.0 bits (92), Expect(2) = 4e-07
 Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
 Frame = +1

Query: 151 AEKKVGEMLEKVVEMRGGGRRV--WDKEVEKLGFGEIEEVNVAMEEMKKRIVLQQRRILS 324
           AEKK GE L +   MR   + +  W+  V++LG  E+E++  A+E++KK +  +  R+L 
Sbjct: 112 AEKKRGEALNR---MRKSSQSMCWWEAPVDELGLQELEQLRYALEDLKKNVAKEIDRVLG 168

Query: 325 EASNM 339
             +++
Sbjct: 169 TTTSL 173



 Score = 38.9 bits (89), Expect(2) = 4e-07
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +2

Query: 14  CNADVAVIAFSLAGNAYAFGDPSVPSVLDRY 106
           C  ++A+I FS AG A++FG P V SVL R+
Sbjct: 44  CGVEIAIIVFSPAGKAFSFGHPEVGSVLKRF 74


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