BLASTX nr result

ID: Cnidium21_contig00036470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036470
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18267.3| unnamed protein product [Vitis vinifera]              160   8e-38
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   160   8e-38
ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   157   1e-36
ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp....   157   1e-36

>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  160 bits (406), Expect = 8e-38
 Identities = 81/119 (68%), Positives = 94/119 (78%)
 Frame = -2

Query: 358 VVVASKAPLPNYRPDLDDKRPQREVVVPLSLQRRIEGLLQEHLDRMHLVSGDINSSVSNT 179
           V+V SK PLPNYRPDLDDKRPQREVV+PLSLQRR+EGLLQEHLDRM L SG ++    + 
Sbjct: 121 VMVVSKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEHLDRMLLSSGKVSDCSDDA 180

Query: 178 EANELAEYVNTNKDDDSFLDRSVMEKILIRQSLRMQNMQRAWQESAEGKQMLNLRRSLP 2
             N   E VN   + DS LD SVMEK+L R+SLRM+NMQRAWQES EGK+ML+ R+SLP
Sbjct: 181 NGNGGFEDVNPEDNPDSLLDGSVMEKVLQRRSLRMRNMQRAWQESPEGKKMLDFRKSLP 239


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score =  160 bits (406), Expect = 8e-38
 Identities = 81/119 (68%), Positives = 94/119 (78%)
 Frame = -2

Query: 358 VVVASKAPLPNYRPDLDDKRPQREVVVPLSLQRRIEGLLQEHLDRMHLVSGDINSSVSNT 179
           V+V SK PLPNYRPDLDDKRPQREVV+PLSLQRR+EGLLQEHLDRM L SG ++    + 
Sbjct: 121 VMVVSKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEHLDRMLLSSGKVSDCSDDA 180

Query: 178 EANELAEYVNTNKDDDSFLDRSVMEKILIRQSLRMQNMQRAWQESAEGKQMLNLRRSLP 2
             N   E VN   + DS LD SVMEK+L R+SLRM+NMQRAWQES EGK+ML+ R+SLP
Sbjct: 181 NGNGGFEDVNPEDNPDSLLDGSVMEKVLQRRSLRMRNMQRAWQESPEGKKMLDFRKSLP 239


>ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|222850795|gb|EEE88342.1|
           predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/119 (64%), Positives = 99/119 (83%)
 Frame = -2

Query: 358 VVVASKAPLPNYRPDLDDKRPQREVVVPLSLQRRIEGLLQEHLDRMHLVSGDINSSVSNT 179
           VVVASK PLPNYRPDLDDKRPQREVV+PLSLQRR+EGLLQEHLDR  L +G +  +  + 
Sbjct: 42  VVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEHLDRTQLSAGKVGGNADDA 101

Query: 178 EANELAEYVNTNKDDDSFLDRSVMEKILIRQSLRMQNMQRAWQESAEGKQMLNLRRSLP 2
             N++ E  + +++ DSFLDRSVME++L R+SLRM+NMQRAW+ES EG++M++ R+SLP
Sbjct: 102 SINQI-EDTSPDENPDSFLDRSVMERVLQRRSLRMRNMQRAWRESLEGRKMMDFRKSLP 159


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/119 (63%), Positives = 96/119 (80%)
 Frame = -2

Query: 358 VVVASKAPLPNYRPDLDDKRPQREVVVPLSLQRRIEGLLQEHLDRMHLVSGDINSSVSNT 179
           VVVASK PLPNYRPDLDDKRPQREVV+PLSLQRR+EGLLQE+LDR+ L S     S+ + 
Sbjct: 146 VVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQLNSAKTTDSLDDV 205

Query: 178 EANELAEYVNTNKDDDSFLDRSVMEKILIRQSLRMQNMQRAWQESAEGKQMLNLRRSLP 2
            +    + +N +++ DSF+D SVMEK+L ++SLRM+NMQRAWQES EG+++L  R+SLP
Sbjct: 206 NSTNQVKDINMDENADSFVDESVMEKVLQKRSLRMRNMQRAWQESPEGRKLLEFRKSLP 264


>ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316958|gb|EFH47380.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1160

 Score =  157 bits (396), Expect = 1e-36
 Identities = 79/119 (66%), Positives = 96/119 (80%)
 Frame = -2

Query: 358 VVVASKAPLPNYRPDLDDKRPQREVVVPLSLQRRIEGLLQEHLDRMHLVSGDINSSVSNT 179
           VVVASK PLPNYRPDLDDKRPQREVV+PLSLQRR+EGLLQEHLDR  L SG  N  V+++
Sbjct: 145 VVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLLQEHLDRQQLSSGKANECVADS 204

Query: 178 EANELAEYVNTNKDDDSFLDRSVMEKILIRQSLRMQNMQRAWQESAEGKQMLNLRRSLP 2
           +  +  E +  +++ DSFLD SVMEK+L R+S+RM+NMQR WQES EG+ ML  R+SLP
Sbjct: 205 QPPKQTEEL-PDENSDSFLDGSVMEKVLQRRSMRMRNMQRTWQESPEGRTMLEFRKSLP 262


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