BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036421
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi...   246   2e-63
emb|CBI16398.3| unnamed protein product [Vitis vinifera]              246   2e-63
emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]   246   2e-63
gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me...   244   6e-63
ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ...   244   6e-63

>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  246 bits (627), Expect = 2e-63
 Identities = 115/175 (65%), Positives = 139/175 (79%)
 Frame = +3

Query: 3   CGNMEKALQVFNEMPDKNSLTWTSIIGGFATHGKAHDAISYFLQMIDCGLEPDAITFLGL 182
           CG + KA+QVF E+P +NSLTWT+II G A HG AH AI+YF +MID  + PD +TFLGL
Sbjct: 388 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 447

Query: 183 LSACCHGGLVEEGRMFFTQMCSKYNITPKLKHYSCMVDXXXXXXXXXXXXXXIKNMPMKA 362
           LSACCHGGLVEEGR +F+QM SK+N++PKLKHYSCMVD              IK+MP++A
Sbjct: 448 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 507

Query: 363 DAVVWGALLFACRVHRNVEIGERAAFKLLEMDPLDSGNYVLLANIYGEAKMWEKA 527
           DAVVWGAL FACR+H NV +GERAA KLL+MDP DSG YVLLAN+YGEA+MW++A
Sbjct: 508 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEA 562



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/136 (22%), Positives = 69/136 (50%)
 Frame = +3

Query: 6   GNMEKALQVFNEMPDKNSLTWTSIIGGFATHGKAHDAISYFLQMIDCGLEPDAITFLGLL 185
           G ++ A ++F+EMPDK+ + W ++IGG+    +  +A++ F +M    + PD +T +  L
Sbjct: 288 GLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCL 347

Query: 186 SACCHGGLVEEGRMFFTQMCSKYNITPKLKHYSCMVDXXXXXXXXXXXXXXIKNMPMKAD 365
           SAC   G ++ G ++      K+ ++  +   + ++D               + +P + +
Sbjct: 348 SACSQLGALDVG-IWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-N 405

Query: 366 AVVWGALLFACRVHRN 413
           ++ W A++    +H N
Sbjct: 406 SLTWTAIISGLALHGN 421


>emb|CBI16398.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  246 bits (627), Expect = 2e-63
 Identities = 115/175 (65%), Positives = 139/175 (79%)
 Frame = +3

Query: 3   CGNMEKALQVFNEMPDKNSLTWTSIIGGFATHGKAHDAISYFLQMIDCGLEPDAITFLGL 182
           CG + KA+QVF E+P +NSLTWT+II G A HG AH AI+YF +MID  + PD +TFLGL
Sbjct: 360 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 419

Query: 183 LSACCHGGLVEEGRMFFTQMCSKYNITPKLKHYSCMVDXXXXXXXXXXXXXXIKNMPMKA 362
           LSACCHGGLVEEGR +F+QM SK+N++PKLKHYSCMVD              IK+MP++A
Sbjct: 420 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 479

Query: 363 DAVVWGALLFACRVHRNVEIGERAAFKLLEMDPLDSGNYVLLANIYGEAKMWEKA 527
           DAVVWGAL FACR+H NV +GERAA KLL+MDP DSG YVLLAN+YGEA+MW++A
Sbjct: 480 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEA 534



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/136 (22%), Positives = 69/136 (50%)
 Frame = +3

Query: 6   GNMEKALQVFNEMPDKNSLTWTSIIGGFATHGKAHDAISYFLQMIDCGLEPDAITFLGLL 185
           G ++ A ++F+EMPDK+ + W ++IGG+    +  +A++ F +M    + PD +T +  L
Sbjct: 260 GLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCL 319

Query: 186 SACCHGGLVEEGRMFFTQMCSKYNITPKLKHYSCMVDXXXXXXXXXXXXXXIKNMPMKAD 365
           SAC   G ++ G ++      K+ ++  +   + ++D               + +P + +
Sbjct: 320 SACSQLGALDVG-IWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-N 377

Query: 366 AVVWGALLFACRVHRN 413
           ++ W A++    +H N
Sbjct: 378 SLTWTAIISGLALHGN 393


>emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
          Length = 599

 Score =  246 bits (627), Expect = 2e-63
 Identities = 115/175 (65%), Positives = 139/175 (79%)
 Frame = +3

Query: 3   CGNMEKALQVFNEMPDKNSLTWTSIIGGFATHGKAHDAISYFLQMIDCGLEPDAITFLGL 182
           CG + KA+QVF E+P +NSLTWT+II G A HG AH AI+YF +MID  + PD +TFLGL
Sbjct: 345 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 404

Query: 183 LSACCHGGLVEEGRMFFTQMCSKYNITPKLKHYSCMVDXXXXXXXXXXXXXXIKNMPMKA 362
           LSACCHGGLVEEGR +F+QM SK+N++PKLKHYSCMVD              IK+MP++A
Sbjct: 405 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 464

Query: 363 DAVVWGALLFACRVHRNVEIGERAAFKLLEMDPLDSGNYVLLANIYGEAKMWEKA 527
           DAVVWGAL FACR+H NV +GERAA KLL+MDP DSG YVLLAN+YGEA+MW++A
Sbjct: 465 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEA 519



 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 34/153 (22%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
 Frame = +3

Query: 3   CGNMEKALQVFN----------------EMPDKNSLTWTSIIGGFATHGKAHDAISYFLQ 134
           CGN+E A ++F+                EMPDK+ + W ++IGG+    +  +A++ F +
Sbjct: 228 CGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNE 287

Query: 135 MIDCGLEPDAITFLGLLSACCHGGLVEEGRMFFTQMCSKYNITPKLKHYSCMVDXXXXXX 314
           M    + PD +T +  LSAC   G ++ G ++      K+ ++  +   + ++D      
Sbjct: 288 MQAMNINPDEVTMVSCLSACSQLGALDVG-IWIHHYIEKHELSLNVALGTALIDMYAKCG 346

Query: 315 XXXXXXXXIKNMPMKADAVVWGALLFACRVHRN 413
                    + +P + +++ W A++    +H N
Sbjct: 347 KITKAIQVFQELPGR-NSLTWTAIISGLALHGN 378


>gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
           small; Tetratricopeptide-like helical [Medicago
           truncatula]
          Length = 971

 Score =  244 bits (623), Expect = 6e-63
 Identities = 114/176 (64%), Positives = 138/176 (78%)
 Frame = +3

Query: 3   CGNMEKALQVFNEMPDKNSLTWTSIIGGFATHGKAHDAISYFLQMIDCGLEPDAITFLGL 182
           CGN+ +ALQVF E+P +N LTWT++I G A HG A DA+SYF +MI  G+ PD ITFLG+
Sbjct: 439 CGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGV 498

Query: 183 LSACCHGGLVEEGRMFFTQMCSKYNITPKLKHYSCMVDXXXXXXXXXXXXXXIKNMPMKA 362
           LSACCHGGLVEEGR +F++M SK+N++PKLKHYSCMVD              +KNMPM A
Sbjct: 499 LSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAA 558

Query: 363 DAVVWGALLFACRVHRNVEIGERAAFKLLEMDPLDSGNYVLLANIYGEAKMWEKAR 530
           DA V GAL FACRV+ NV+IGER AFKLLE+DP DSGNYVLLA++Y EAKMW++AR
Sbjct: 559 DAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEAR 614


>ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355506215|gb|AES87357.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1026

 Score =  244 bits (623), Expect = 6e-63
 Identities = 114/176 (64%), Positives = 138/176 (78%)
 Frame = +3

Query: 3   CGNMEKALQVFNEMPDKNSLTWTSIIGGFATHGKAHDAISYFLQMIDCGLEPDAITFLGL 182
           CGN+ +ALQVF E+P +N LTWT++I G A HG A DA+SYF +MI  G+ PD ITFLG+
Sbjct: 439 CGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGV 498

Query: 183 LSACCHGGLVEEGRMFFTQMCSKYNITPKLKHYSCMVDXXXXXXXXXXXXXXIKNMPMKA 362
           LSACCHGGLVEEGR +F++M SK+N++PKLKHYSCMVD              +KNMPM A
Sbjct: 499 LSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAA 558

Query: 363 DAVVWGALLFACRVHRNVEIGERAAFKLLEMDPLDSGNYVLLANIYGEAKMWEKAR 530
           DA V GAL FACRV+ NV+IGER AFKLLE+DP DSGNYVLLA++Y EAKMW++AR
Sbjct: 559 DAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEAR 614