BLASTX nr result

ID: Cnidium21_contig00036418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036418
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513717.1| expressed protein, putative [Ricinus communi...    91   8e-17
ref|XP_002274971.1| PREDICTED: uncharacterized protein LOC100252...    79   5e-13
emb|CAN76581.1| hypothetical protein VITISV_034321 [Vitis vinifera]    79   5e-13
ref|XP_002298267.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_004139141.1| PREDICTED: transcription factor LHW-like [Cu...    72   6e-11

>ref|XP_002513717.1| expressed protein, putative [Ricinus communis]
           gi|223547168|gb|EEF48664.1| expressed protein, putative
           [Ricinus communis]
          Length = 933

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 55/115 (47%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
 Frame = +3

Query: 3   HGVVQLGSSSSIIENMQFMDDVKTLILQLGYVPGSFFSDNFAAKEPSSEIGAVVLENPAS 182
           HGVVQLGSSS+I+EN+ F+++VK+LILQLG VPG+  SDNF  KE +  I   V      
Sbjct: 143 HGVVQLGSSSTIMENLGFVNNVKSLILQLGCVPGALLSDNFGVKEATERIRVPVSLGTTD 202

Query: 183 TSSSGKCKVTDLNSY-ITNNYNQQNDSLAPMVVGQTS-SLVGQIKDNVQSTGPNF 341
           + S        LNS+ + NNYNQQ+ S  P  + Q S S + QI+D +QST   F
Sbjct: 203 SISLHLSGNKVLNSFSLANNYNQQSVSSLPSRIAQASHSPIRQIQDTLQSTASAF 257


>ref|XP_002274971.1| PREDICTED: uncharacterized protein LOC100252988 [Vitis vinifera]
          Length = 973

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   HGVVQLGSSSSIIENMQFMDDVKTLILQLGYVPGSFFSDNFAAKEPSSEIG-AVVLENPA 179
           HGV+Q GSS +I+EN  F++DVK+LILQLG VPG+  S+++A KE S  IG  + +    
Sbjct: 157 HGVIQFGSSLAIMENAGFVNDVKSLILQLGCVPGALLSESYAIKETSQNIGEPISVAASI 216

Query: 180 STSSSGKCKVTDLNSYITNNYNQQ-NDSLAPMVVGQTS-SLVGQIKDN 317
               S   +VT+ + +I +  +QQ N S A  +VGQ S S++ QI+DN
Sbjct: 217 YGDPSRNYEVTNSSPFIADGCDQQSNSSQASRLVGQPSHSIMRQIQDN 264


>emb|CAN76581.1| hypothetical protein VITISV_034321 [Vitis vinifera]
          Length = 1023

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   HGVVQLGSSSSIIENMQFMDDVKTLILQLGYVPGSFFSDNFAAKEPSSEIG-AVVLENPA 179
           HGV+Q GSS +I+EN  F++DVK+LILQLG VPG+  S+++A KE S  IG  + +    
Sbjct: 157 HGVIQFGSSLAIMENAGFVNDVKSLILQLGCVPGALLSESYAIKETSQNIGEPISVAASI 216

Query: 180 STSSSGKCKVTDLNSYITNNYNQQ-NDSLAPMVVGQTS-SLVGQIKDN 317
               S   +VT+ + +I +  +QQ N S A  +VGQ S S++ QI+DN
Sbjct: 217 YGDPSRNYEVTNSSPFIADGCDQQSNSSQASRLVGQPSHSIMRQIQDN 264


>ref|XP_002298267.1| predicted protein [Populus trichocarpa] gi|222845525|gb|EEE83072.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   HGVVQLGSSSSIIENMQFMDDVKTLILQLGYVPGSFFSDNFAAKEPSSEIGAVVLENPA- 179
           HGV+QLGSS +I+EN+ F+++VK+LILQLG VPG+  SDN   KEP+  IG  +    A 
Sbjct: 126 HGVLQLGSSVAILENIGFVNNVKSLILQLGCVPGALLSDNHMEKEPTERIGMPISCGMAL 185

Query: 180 STSSSGKCKVTDLNSYITNNYNQQ--NDSLAPMVVGQTSSLVGQIKDN 317
               SG  KV      + ++ NQQ  +   A  +VGQ S    +  DN
Sbjct: 186 PVCFSGNYKVPSSTPSLADSCNQQIISSQEASRIVGQPSCSQTRQPDN 233


>ref|XP_004139141.1| PREDICTED: transcription factor LHW-like [Cucumis sativus]
           gi|449476328|ref|XP_004154707.1| PREDICTED:
           transcription factor LHW-like [Cucumis sativus]
          Length = 959

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   HGVVQLGSSSSIIENMQFMDDVKTLILQLGYVPGSFFSDNFAAKEPSSEIGA-VVLENPA 179
           HGVVQLGSS SI+ENM F++ VK+LIL LG VPG+  S+ +  K+P    G  V L    
Sbjct: 154 HGVVQLGSSFSIMENMMFVNHVKSLILHLGSVPGALLSETYDGKDPVGNFGVPVTLGMAG 213

Query: 180 STSSSGKCKVTDLNSYITNNYNQQNDSLAPMVVGQTSSLVGQIKDN 317
            T +S  C +    S + N   Q N  LA      +  L+ +I+ N
Sbjct: 214 LTDASQNCNLMKPLSMVDNCNPQDNSLLASRSSQPSGLLLQEIRPN 259


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