BLASTX nr result

ID: Cnidium21_contig00036416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036416
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223...    71   1e-10
emb|CBI32804.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...    70   1e-10
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...    69   5e-10
ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula...    67   1e-09

>ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223523786|gb|EEF27189.1|
           helicase, putative [Ricinus communis]
          Length = 518

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 28/42 (66%), Positives = 39/42 (92%)
 Frame = -2

Query: 157 RWLVTGTPIQNGTVELFSLMSFLKYQPFANRNYWNTLVQRPV 32
           RW+VTGTPIQNG+ +LFSLM+FL+++PF+ +NYW +LVQRP+
Sbjct: 453 RWVVTGTPIQNGSFDLFSLMAFLRFEPFSIKNYWQSLVQRPL 494


>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 28/42 (66%), Positives = 39/42 (92%)
 Frame = -2

Query: 157 RWLVTGTPIQNGTVELFSLMSFLKYQPFANRNYWNTLVQRPV 32
           RW+VTGTPIQNGT +LFSLM+FL+++PF+ ++YW +LVQRP+
Sbjct: 348 RWVVTGTPIQNGTFDLFSLMAFLRFEPFSIKSYWQSLVQRPL 389


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1-like [Vitis vinifera]
          Length = 874

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 28/42 (66%), Positives = 39/42 (92%)
 Frame = -2

Query: 157 RWLVTGTPIQNGTVELFSLMSFLKYQPFANRNYWNTLVQRPV 32
           RW+VTGTPIQNGT +LFSLM+FL+++PF+ ++YW +LVQRP+
Sbjct: 456 RWVVTGTPIQNGTFDLFSLMAFLRFEPFSIKSYWQSLVQRPL 497


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 26/42 (61%), Positives = 40/42 (95%)
 Frame = -2

Query: 157 RWLVTGTPIQNGTVELFSLMSFLKYQPFANRNYWNTLVQRPV 32
           RW+VTGTPIQNG+++LFSLM+FL+++PF+ ++YW +L+QRP+
Sbjct: 381 RWVVTGTPIQNGSLDLFSLMAFLRFEPFSIKSYWQSLLQRPL 422


>ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
           gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger,
           RING-type; ATP-requiring DNA helicase RecQ [Medicago
           truncatula] gi|355499950|gb|AES81153.1| DNA repair
           protein RAD5 [Medicago truncatula]
          Length = 844

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 27/42 (64%), Positives = 37/42 (88%)
 Frame = -2

Query: 157 RWLVTGTPIQNGTVELFSLMSFLKYQPFANRNYWNTLVQRPV 32
           RW VTGTPIQNG+ +LFSLM+FL ++PF+ ++YW +LVQRP+
Sbjct: 398 RWAVTGTPIQNGSYDLFSLMAFLHFEPFSIKSYWQSLVQRPL 439


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