BLASTX nr result

ID: Cnidium21_contig00036402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036402
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813...   243   1e-62
ref|XP_003606513.1| CCR4-NOT transcription complex subunit [Medi...   243   1e-62
ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801...   242   2e-62
ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267...   238   4e-61
emb|CBI16241.3| unnamed protein product [Vitis vinifera]              238   4e-61

>ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813427 [Glycine max]
          Length = 1023

 Score =  243 bits (620), Expect = 1e-62
 Identities = 117/156 (75%), Positives = 134/156 (85%), Gaps = 1/156 (0%)
 Frame = -3

Query: 465 GRCPACRTPYNKEKIVDKAAECERLLSELNVDXXXXXXXXXK-APDGRKNLSSVRVIQRN 289
           GRCPACR+PY+KEKIV  AA C+RL++ +N++           + DGRK LSSVRVIQRN
Sbjct: 51  GRCPACRSPYDKEKIVGTAANCDRLVNGVNIEKRMKTQKTKSKSTDGRKQLSSVRVIQRN 110

Query: 288 LVYIVGLPLTLADEDLLRGMEYFAQYGKVLKVSISRTAAGTIQQFPNSTCSVYITYSKEE 109
           LVYIVGLPL LADEDLL+  EYF+QYGKVLKVS+SRTAAG IQQFPN TCSVYITYSKEE
Sbjct: 111 LVYIVGLPLNLADEDLLQRREYFSQYGKVLKVSMSRTAAGVIQQFPNDTCSVYITYSKEE 170

Query: 108 EAVRCIQSVHGYILEGRPLRACFGTTKYCHAWLRSV 1
           EA+RCIQ+VHG++LEGRPLRACFGTTKYCHAWLR+V
Sbjct: 171 EAIRCIQNVHGFVLEGRPLRACFGTTKYCHAWLRNV 206


>ref|XP_003606513.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
           gi|355507568|gb|AES88710.1| CCR4-NOT transcription
           complex subunit [Medicago truncatula]
          Length = 1223

 Score =  243 bits (620), Expect = 1e-62
 Identities = 118/155 (76%), Positives = 133/155 (85%), Gaps = 1/155 (0%)
 Frame = -3

Query: 465 GRCPACRTPYNKEKIVDKAAECERLLSELNVDXXXXXXXXXK-APDGRKNLSSVRVIQRN 289
           GRCPACR+PY+KEKIV  AA+CERLL+E+N++           + DGRK LSSVRVIQRN
Sbjct: 59  GRCPACRSPYDKEKIVGTAAKCERLLNEMNLEKKVKNQKAKSKSSDGRKQLSSVRVIQRN 118

Query: 288 LVYIVGLPLTLADEDLLRGMEYFAQYGKVLKVSISRTAAGTIQQFPNSTCSVYITYSKEE 109
           LVYIVGLPL LADEDLL+  EYF QYGKVLKVS+SRTAAG IQQFPN TCSVYITYS EE
Sbjct: 119 LVYIVGLPLDLADEDLLQKREYFGQYGKVLKVSMSRTAAGVIQQFPNETCSVYITYSSEE 178

Query: 108 EAVRCIQSVHGYILEGRPLRACFGTTKYCHAWLRS 4
           E++RCIQ+VHG+ILEGRPLRACFGTTKYCHAWLR+
Sbjct: 179 ESIRCIQNVHGFILEGRPLRACFGTTKYCHAWLRN 213


>ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801880 [Glycine max]
          Length = 1022

 Score =  242 bits (618), Expect = 2e-62
 Identities = 119/156 (76%), Positives = 133/156 (85%), Gaps = 1/156 (0%)
 Frame = -3

Query: 465 GRCPACRTPYNKEKIVDKAAECERLLSELNVDXXXXXXXXXK-APDGRKNLSSVRVIQRN 289
           GRCPACR+PY+KEKIV  AA CERL++ +N++           + DGRK LSSVRVIQRN
Sbjct: 51  GRCPACRSPYDKEKIVGTAANCERLVNGINMEKKMKTQKAKSKSSDGRKQLSSVRVIQRN 110

Query: 288 LVYIVGLPLTLADEDLLRGMEYFAQYGKVLKVSISRTAAGTIQQFPNSTCSVYITYSKEE 109
           LVYIVGLPL LADEDLL+  EYFAQYGKVLKVS+SRTAAG IQQFPN TCSVYITYSKEE
Sbjct: 111 LVYIVGLPLNLADEDLLQRREYFAQYGKVLKVSMSRTAAGVIQQFPNDTCSVYITYSKEE 170

Query: 108 EAVRCIQSVHGYILEGRPLRACFGTTKYCHAWLRSV 1
           EAV CIQ+VHG++LEGRPLRACFGTTKYCHAWLR+V
Sbjct: 171 EAVCCIQNVHGFVLEGRPLRACFGTTKYCHAWLRNV 206


>ref|XP_002281895.2| PREDICTED: uncharacterized protein LOC100267264 [Vitis vinifera]
          Length = 1024

 Score =  238 bits (607), Expect = 4e-61
 Identities = 115/156 (73%), Positives = 131/156 (83%), Gaps = 1/156 (0%)
 Frame = -3

Query: 465 GRCPACRTPYNKEKIVDKAAECERLLSELNVDXXXXXXXXXKA-PDGRKNLSSVRVIQRN 289
           GRCPACR PYNKEKIV  AA+C+RL++E+N++             +GRK L SVRVIQRN
Sbjct: 51  GRCPACRVPYNKEKIVGMAADCKRLVAEINLERKMKSQKAKTKLSEGRKQLGSVRVIQRN 110

Query: 288 LVYIVGLPLTLADEDLLRGMEYFAQYGKVLKVSISRTAAGTIQQFPNSTCSVYITYSKEE 109
           LVYIVGLPL LADEDLL+  EYF  YGKVLKVS+SRTAAG IQQFPN+TCSVYITYSKEE
Sbjct: 111 LVYIVGLPLNLADEDLLQRKEYFGLYGKVLKVSMSRTAAGVIQQFPNNTCSVYITYSKEE 170

Query: 108 EAVRCIQSVHGYILEGRPLRACFGTTKYCHAWLRSV 1
           EAVRCIQ+VHG++L+GRPLRACFGTTKYCH WLR+V
Sbjct: 171 EAVRCIQTVHGFVLDGRPLRACFGTTKYCHQWLRNV 206


>emb|CBI16241.3| unnamed protein product [Vitis vinifera]
          Length = 1022

 Score =  238 bits (607), Expect = 4e-61
 Identities = 115/156 (73%), Positives = 131/156 (83%), Gaps = 1/156 (0%)
 Frame = -3

Query: 465 GRCPACRTPYNKEKIVDKAAECERLLSELNVDXXXXXXXXXKA-PDGRKNLSSVRVIQRN 289
           GRCPACR PYNKEKIV  AA+C+RL++E+N++             +GRK L SVRVIQRN
Sbjct: 51  GRCPACRVPYNKEKIVGMAADCKRLVAEINLERKMKSQKAKTKLSEGRKQLGSVRVIQRN 110

Query: 288 LVYIVGLPLTLADEDLLRGMEYFAQYGKVLKVSISRTAAGTIQQFPNSTCSVYITYSKEE 109
           LVYIVGLPL LADEDLL+  EYF  YGKVLKVS+SRTAAG IQQFPN+TCSVYITYSKEE
Sbjct: 111 LVYIVGLPLNLADEDLLQRKEYFGLYGKVLKVSMSRTAAGVIQQFPNNTCSVYITYSKEE 170

Query: 108 EAVRCIQSVHGYILEGRPLRACFGTTKYCHAWLRSV 1
           EAVRCIQ+VHG++L+GRPLRACFGTTKYCH WLR+V
Sbjct: 171 EAVRCIQTVHGFVLDGRPLRACFGTTKYCHQWLRNV 206


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