BLASTX nr result

ID: Cnidium21_contig00036366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036366
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...   265   2e-69
emb|CBI20254.3| unnamed protein product [Vitis vinifera]              265   2e-69
ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|2...   262   2e-68
ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containi...   253   9e-66
ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arab...   235   2e-60

>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Vitis vinifera]
          Length = 464

 Score =  265 bits (678), Expect = 2e-69
 Identities = 126/169 (74%), Positives = 150/169 (88%)
 Frame = +2

Query: 2   WNSVIEGLAVHGNAEEALSMFCRMEKENIKPNGITFISVLSACTHAGLVEEGRRWFQKMT 181
           WNS+IEGLAVHG AEEAL+MF RM++E IKPNG+TFISVL ACTHAGLVEEGR+ F  M+
Sbjct: 242 WNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMS 301

Query: 182 LDLSIAPQIEHYGCMVDLLCKAGLLEDALELIQSMRMEPNAIIWGAVLGGSKLYKNLDIA 361
            D SI P+IEHYGCMVDLL KAGLLEDALEL++SMRMEPN++IWGA+LGG KL++NL IA
Sbjct: 302 RDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIA 361

Query: 362 QVAANKLMILEPNNSGYYSLLVSMHADANRWNEVAKARSTMKELGVEKS 508
           QVA N+  +LEPNNSGYY+LLV+M+A+ NRW+EVA  R+TMKELGVEK+
Sbjct: 362 QVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKT 410


>emb|CBI20254.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  265 bits (678), Expect = 2e-69
 Identities = 126/169 (74%), Positives = 150/169 (88%)
 Frame = +2

Query: 2   WNSVIEGLAVHGNAEEALSMFCRMEKENIKPNGITFISVLSACTHAGLVEEGRRWFQKMT 181
           WNS+IEGLAVHG AEEAL+MF RM++E IKPNG+TFISVL ACTHAGLVEEGR+ F  M+
Sbjct: 272 WNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMS 331

Query: 182 LDLSIAPQIEHYGCMVDLLCKAGLLEDALELIQSMRMEPNAIIWGAVLGGSKLYKNLDIA 361
            D SI P+IEHYGCMVDLL KAGLLEDALEL++SMRMEPN++IWGA+LGG KL++NL IA
Sbjct: 332 RDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIA 391

Query: 362 QVAANKLMILEPNNSGYYSLLVSMHADANRWNEVAKARSTMKELGVEKS 508
           QVA N+  +LEPNNSGYY+LLV+M+A+ NRW+EVA  R+TMKELGVEK+
Sbjct: 392 QVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKT 440


>ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|222843586|gb|EEE81133.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score =  262 bits (669), Expect = 2e-68
 Identities = 124/170 (72%), Positives = 148/170 (87%)
 Frame = +2

Query: 2   WNSVIEGLAVHGNAEEALSMFCRMEKENIKPNGITFISVLSACTHAGLVEEGRRWFQKMT 181
           WNSVIEGLAVHG AEEAL+MF +ME+E IKPNG+TF+SVLSAC HAGL+EEGR+ F  MT
Sbjct: 312 WNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMT 371

Query: 182 LDLSIAPQIEHYGCMVDLLCKAGLLEDALELIQSMRMEPNAIIWGAVLGGSKLYKNLDIA 361
            D SI P +EHYGCMVDLL KAGLLE+AL+LI++M++EPNA+IWGA+L G KL++NL+IA
Sbjct: 372 RDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIA 431

Query: 362 QVAANKLMILEPNNSGYYSLLVSMHADANRWNEVAKARSTMKELGVEKSC 511
           QVAANKLM+LEP NSGYY+LLV+M+A+ NRW E AK R TMKE GVEK C
Sbjct: 432 QVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRC 481


>ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Glycine max]
          Length = 529

 Score =  253 bits (647), Expect = 9e-66
 Identities = 115/170 (67%), Positives = 142/170 (83%)
 Frame = +2

Query: 2   WNSVIEGLAVHGNAEEALSMFCRMEKENIKPNGITFISVLSACTHAGLVEEGRRWFQKMT 181
           WN +I+GLA HG  EEAL MF  ME++ I+PN +TFIS+L+ACTHAG +EEGRRWF  M 
Sbjct: 308 WNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMV 367

Query: 182 LDLSIAPQIEHYGCMVDLLCKAGLLEDALELIQSMRMEPNAIIWGAVLGGSKLYKNLDIA 361
            D  IAPQ+EHYGCMVDLL KAGLLEDALE+I++M +EPN+ IWGA+L G KL+KNL+IA
Sbjct: 368 QDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIA 427

Query: 362 QVAANKLMILEPNNSGYYSLLVSMHADANRWNEVAKARSTMKELGVEKSC 511
            +A   LM+LEP+NSG+YSLLV+M+A+ NRWNEVAK R+TMK+LGVEK C
Sbjct: 428 HIAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRC 477


>ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
            lyrata] gi|297338164|gb|EFH68581.1| hypothetical protein
            ARALYDRAFT_311694 [Arabidopsis lyrata subsp. lyrata]
          Length = 1329

 Score =  235 bits (600), Expect = 2e-60
 Identities = 110/170 (64%), Positives = 137/170 (80%)
 Frame = +2

Query: 2    WNSVIEGLAVHGNAEEALSMFCRMEKENIKPNGITFISVLSACTHAGLVEEGRRWFQKMT 181
            WNS+IEGLA HG A+EAL MF +ME E++KPN +TF+SV +ACTHAGLVEEGRR ++ M 
Sbjct: 1108 WNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMI 1167

Query: 182  LDLSIAPQIEHYGCMVDLLCKAGLLEDALELIQSMRMEPNAIIWGAVLGGSKLYKNLDIA 361
             D SI   +EHYGCMV L  KAGL+ +ALELI SM  EPNA+IWGA+L G +++KNL+IA
Sbjct: 1168 DDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDGCRIHKNLEIA 1227

Query: 362  QVAANKLMILEPNNSGYYSLLVSMHADANRWNEVAKARSTMKELGVEKSC 511
            ++A NKLMILEP NSGYY LLVSM+A+ NRW +VA+ R  M+ELG+EK C
Sbjct: 1228 EIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKIC 1277



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/110 (29%), Positives = 57/110 (51%)
 Frame = +2

Query: 2    WNSVIEGLAVHGNAEEALSMFCRMEKENIKPNGITFISVLSACTHAGLVEEGRRWFQKMT 181
            W ++I G + +    EA+++F +M +E I P+ +T  +V+SAC H G++E G+      T
Sbjct: 1007 WTTMINGYSRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKE-VHMYT 1065

Query: 182  LDLSIAPQIEHYGCMVDLLCKAGLLEDALELIQSMRMEPNAIIWGAVLGG 331
            +       +     +VD+  K G LE AL L+     + N   W +++ G
Sbjct: 1066 VQNGFVLDVYIGSALVDMYSKCGSLERAL-LVFFNLPKKNLFCWNSIIEG 1114


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