BLASTX nr result

ID: Cnidium21_contig00036362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036362
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304797.1| multidrug resistance protein ABC transporter...   102   1e-27
ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3...   100   2e-27
ref|XP_002300362.1| multidrug resistance protein ABC transporter...   102   2e-27
ref|XP_003617730.1| Multidrug resistance protein ABC transporter...   100   9e-27
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   100   1e-26

>ref|XP_002304797.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222842229|gb|EEE79776.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1456

 Score =  102 bits (255), Expect(2) = 1e-27
 Identities = 50/79 (63%), Positives = 61/79 (77%)
 Frame = -2

Query: 239  FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60
            FFDATP+GRI+NR S DQS LE +I  L+ G+  + I LL IIAVMS VAW+V ++ IP 
Sbjct: 996  FFDATPSGRIINRASKDQSALEMQIPDLVGGLAFEAIMLLGIIAVMSQVAWQVFIVSIPV 1055

Query: 59   IFASIWYQQYYMPASRELS 3
            I A IWYQQYY+PA+RELS
Sbjct: 1056 IAACIWYQQYYIPAARELS 1074



 Score = 45.1 bits (105), Expect(2) = 1e-27
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = -1

Query: 321  LVVATGYKTATILFKKMLETIFRAPMSFF 235
            L+V  GYKTAT+LF K+ + IFRAPMSFF
Sbjct: 969  LLVTAGYKTATLLFNKLHQCIFRAPMSFF 997


>ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1490

 Score =  100 bits (249), Expect(2) = 2e-27
 Identities = 48/79 (60%), Positives = 60/79 (75%)
 Frame = -2

Query: 239  FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60
            FFD+TP+GR+LNR STDQS ++T I   +       IQLL IIAVMS VAW+V ++FIP 
Sbjct: 1009 FFDSTPSGRVLNRASTDQSTVDTDIPYQIGSFAFSMIQLLGIIAVMSQVAWQVFIVFIPV 1068

Query: 59   IFASIWYQQYYMPASRELS 3
            I  SIWYQQYY+P++RELS
Sbjct: 1069 IAVSIWYQQYYIPSARELS 1087



 Score = 47.0 bits (110), Expect(2) = 2e-27
 Identities = 24/34 (70%), Positives = 26/34 (76%)
 Frame = -1

Query: 336  LVVNSLVVATGYKTATILFKKMLETIFRAPMSFF 235
            LV + L+V  GYKTATILF KM   IFRAPMSFF
Sbjct: 977  LVRSMLLVTVGYKTATILFNKMHFCIFRAPMSFF 1010


>ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222847620|gb|EEE85167.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1488

 Score =  102 bits (254), Expect(2) = 2e-27
 Identities = 49/79 (62%), Positives = 63/79 (79%)
 Frame = -2

Query: 239  FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60
            FFD+TP+GRILNR STDQS +ET+I   +  +   +IQLL IIAVMS VAW+V ++FIP 
Sbjct: 1010 FFDSTPSGRILNRASTDQSAVETQIPYQVGALAFSSIQLLGIIAVMSQVAWQVFIVFIPV 1069

Query: 59   IFASIWYQQYYMPASRELS 3
            I A IWYQ+YY+P++RELS
Sbjct: 1070 IAACIWYQRYYIPSARELS 1088



 Score = 44.7 bits (104), Expect(2) = 2e-27
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = -1

Query: 324  SLVVATGYKTATILFKKMLETIFRAPMSFF 235
            +L+V  GYKTAT+LF KM   IFRAPMSFF
Sbjct: 982  TLLVTAGYKTATLLFNKMHLCIFRAPMSFF 1011


>ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355519065|gb|AET00689.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1521

 Score = 99.8 bits (247), Expect(2) = 9e-27
 Identities = 48/79 (60%), Positives = 60/79 (75%)
 Frame = -2

Query: 239  FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60
            FFD+TP+GRILNR STDQS ++T I   +       IQLL IIAVMS VAW+V ++FIP 
Sbjct: 1045 FFDSTPSGRILNRASTDQSAVDTDIPYQIGSFAFSIIQLLGIIAVMSQVAWQVFIVFIPV 1104

Query: 59   IFASIWYQQYYMPASRELS 3
            I  SIWYQ+YY+P++RELS
Sbjct: 1105 IAVSIWYQRYYLPSARELS 1123



 Score = 45.4 bits (106), Expect(2) = 9e-27
 Identities = 24/34 (70%), Positives = 25/34 (73%)
 Frame = -1

Query: 336  LVVNSLVVATGYKTATILFKKMLETIFRAPMSFF 235
            LV   L+V  GYKTATILF KM   IFRAPMSFF
Sbjct: 1013 LVRALLLVTVGYKTATILFNKMHLCIFRAPMSFF 1046


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  100 bits (248), Expect(2) = 1e-26
 Identities = 48/79 (60%), Positives = 59/79 (74%)
 Frame = -2

Query: 239  FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60
            FFDATP+GRILNR STDQS ++T I+  +       IQLL IIAVMS VAW+V ++FIP 
Sbjct: 1007 FFDATPSGRILNRASTDQSTIDTNIATQVGACAFQLIQLLGIIAVMSQVAWQVFIVFIPV 1066

Query: 59   IFASIWYQQYYMPASRELS 3
                IWYQQYY+P++RELS
Sbjct: 1067 AATCIWYQQYYIPSARELS 1085



 Score = 44.7 bits (104), Expect(2) = 1e-26
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = -1

Query: 321  LVVATGYKTATILFKKMLETIFRAPMSFF 235
            L+V  GYKTATILF KM   +FRAPMSFF
Sbjct: 980  LLVTAGYKTATILFNKMHLCVFRAPMSFF 1008


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