BLASTX nr result
ID: Cnidium21_contig00036362
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00036362 (336 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304797.1| multidrug resistance protein ABC transporter... 102 1e-27 ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3... 100 2e-27 ref|XP_002300362.1| multidrug resistance protein ABC transporter... 102 2e-27 ref|XP_003617730.1| Multidrug resistance protein ABC transporter... 100 9e-27 ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3... 100 1e-26 >ref|XP_002304797.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222842229|gb|EEE79776.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1456 Score = 102 bits (255), Expect(2) = 1e-27 Identities = 50/79 (63%), Positives = 61/79 (77%) Frame = -2 Query: 239 FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60 FFDATP+GRI+NR S DQS LE +I L+ G+ + I LL IIAVMS VAW+V ++ IP Sbjct: 996 FFDATPSGRIINRASKDQSALEMQIPDLVGGLAFEAIMLLGIIAVMSQVAWQVFIVSIPV 1055 Query: 59 IFASIWYQQYYMPASRELS 3 I A IWYQQYY+PA+RELS Sbjct: 1056 IAACIWYQQYYIPAARELS 1074 Score = 45.1 bits (105), Expect(2) = 1e-27 Identities = 20/29 (68%), Positives = 24/29 (82%) Frame = -1 Query: 321 LVVATGYKTATILFKKMLETIFRAPMSFF 235 L+V GYKTAT+LF K+ + IFRAPMSFF Sbjct: 969 LLVTAGYKTATLLFNKLHQCIFRAPMSFF 997 >ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3-like [Glycine max] Length = 1490 Score = 100 bits (249), Expect(2) = 2e-27 Identities = 48/79 (60%), Positives = 60/79 (75%) Frame = -2 Query: 239 FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60 FFD+TP+GR+LNR STDQS ++T I + IQLL IIAVMS VAW+V ++FIP Sbjct: 1009 FFDSTPSGRVLNRASTDQSTVDTDIPYQIGSFAFSMIQLLGIIAVMSQVAWQVFIVFIPV 1068 Query: 59 IFASIWYQQYYMPASRELS 3 I SIWYQQYY+P++RELS Sbjct: 1069 IAVSIWYQQYYIPSARELS 1087 Score = 47.0 bits (110), Expect(2) = 2e-27 Identities = 24/34 (70%), Positives = 26/34 (76%) Frame = -1 Query: 336 LVVNSLVVATGYKTATILFKKMLETIFRAPMSFF 235 LV + L+V GYKTATILF KM IFRAPMSFF Sbjct: 977 LVRSMLLVTVGYKTATILFNKMHFCIFRAPMSFF 1010 >ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222847620|gb|EEE85167.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1488 Score = 102 bits (254), Expect(2) = 2e-27 Identities = 49/79 (62%), Positives = 63/79 (79%) Frame = -2 Query: 239 FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60 FFD+TP+GRILNR STDQS +ET+I + + +IQLL IIAVMS VAW+V ++FIP Sbjct: 1010 FFDSTPSGRILNRASTDQSAVETQIPYQVGALAFSSIQLLGIIAVMSQVAWQVFIVFIPV 1069 Query: 59 IFASIWYQQYYMPASRELS 3 I A IWYQ+YY+P++RELS Sbjct: 1070 IAACIWYQRYYIPSARELS 1088 Score = 44.7 bits (104), Expect(2) = 2e-27 Identities = 21/30 (70%), Positives = 24/30 (80%) Frame = -1 Query: 324 SLVVATGYKTATILFKKMLETIFRAPMSFF 235 +L+V GYKTAT+LF KM IFRAPMSFF Sbjct: 982 TLLVTAGYKTATLLFNKMHLCIFRAPMSFF 1011 >ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] gi|355519065|gb|AET00689.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] Length = 1521 Score = 99.8 bits (247), Expect(2) = 9e-27 Identities = 48/79 (60%), Positives = 60/79 (75%) Frame = -2 Query: 239 FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60 FFD+TP+GRILNR STDQS ++T I + IQLL IIAVMS VAW+V ++FIP Sbjct: 1045 FFDSTPSGRILNRASTDQSAVDTDIPYQIGSFAFSIIQLLGIIAVMSQVAWQVFIVFIPV 1104 Query: 59 IFASIWYQQYYMPASRELS 3 I SIWYQ+YY+P++RELS Sbjct: 1105 IAVSIWYQRYYLPSARELS 1123 Score = 45.4 bits (106), Expect(2) = 9e-27 Identities = 24/34 (70%), Positives = 25/34 (73%) Frame = -1 Query: 336 LVVNSLVVATGYKTATILFKKMLETIFRAPMSFF 235 LV L+V GYKTATILF KM IFRAPMSFF Sbjct: 1013 LVRALLLVTVGYKTATILFNKMHLCIFRAPMSFF 1046 >ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1488 Score = 100 bits (248), Expect(2) = 1e-26 Identities = 48/79 (60%), Positives = 59/79 (74%) Frame = -2 Query: 239 FFDATPAGRILNRCSTDQSVLETRISPLLQGIISDTIQLLVIIAVMSTVAWEVLLIFIPF 60 FFDATP+GRILNR STDQS ++T I+ + IQLL IIAVMS VAW+V ++FIP Sbjct: 1007 FFDATPSGRILNRASTDQSTIDTNIATQVGACAFQLIQLLGIIAVMSQVAWQVFIVFIPV 1066 Query: 59 IFASIWYQQYYMPASRELS 3 IWYQQYY+P++RELS Sbjct: 1067 AATCIWYQQYYIPSARELS 1085 Score = 44.7 bits (104), Expect(2) = 1e-26 Identities = 21/29 (72%), Positives = 23/29 (79%) Frame = -1 Query: 321 LVVATGYKTATILFKKMLETIFRAPMSFF 235 L+V GYKTATILF KM +FRAPMSFF Sbjct: 980 LLVTAGYKTATILFNKMHLCVFRAPMSFF 1008