BLASTX nr result

ID: Cnidium21_contig00036361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036361
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...   295   2e-78
ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   294   5e-78
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              294   5e-78
ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6...   286   1e-75
ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chl...   286   1e-75

>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score =  295 bits (756), Expect = 2e-78
 Identities = 152/183 (83%), Positives = 167/183 (91%)
 Frame = +3

Query: 3   VNDGETVLKQIELEDHLENVGVKLVRQAGAKTNDLAGDGSTTSVLLAHGLIAEGVKVIAA 182
           VNDGETVLKQIELED LENVGVKLVRQAGAKTNDLAGDGSTTSV+LAHGLIAEGVKVIAA
Sbjct: 86  VNDGETVLKQIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSVVLAHGLIAEGVKVIAA 145

Query: 183 GMNPIQISRGIEKTSLALVSELKSMSREVEDHEIADVASVSAGNDPEVGKMISEALKQVG 362
           GMNP+Q++RGIE+TS ALVSELK MSREVED EIA VA+VSAGND  VGKMIS+AL++VG
Sbjct: 146 GMNPVQVARGIERTSKALVSELKLMSREVEDDEIAAVAAVSAGNDYAVGKMISDALREVG 205

Query: 363 KRGVITIEKGNSADNTLQIVEGMQFERGFLSPYFVTDRRRMIVELQNCKLLLVDKIIKNP 542
           KRGV+TI+KG   DN LQIV+GMQF+RG+LSPYFVTDRR+M VE  NCKLLLVDK I NP
Sbjct: 206 KRGVVTIDKGEYIDNNLQIVKGMQFDRGYLSPYFVTDRRKMTVEFHNCKLLLVDKKITNP 265

Query: 543 KEM 551
           KEM
Sbjct: 266 KEM 268


>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  294 bits (753), Expect = 5e-78
 Identities = 151/183 (82%), Positives = 169/183 (92%)
 Frame = +3

Query: 3   VNDGETVLKQIELEDHLENVGVKLVRQAGAKTNDLAGDGSTTSVLLAHGLIAEGVKVIAA 182
           VNDGETVLK+IELED LENVGVKLVRQAGAKTN LAGDGSTTSV+LA GLIAEGVKVIAA
Sbjct: 77  VNDGETVLKEIELEDPLENVGVKLVRQAGAKTNHLAGDGSTTSVILARGLIAEGVKVIAA 136

Query: 183 GMNPIQISRGIEKTSLALVSELKSMSREVEDHEIADVASVSAGNDPEVGKMISEALKQVG 362
           GMNPIQISRGIEKT++ALVSELK MSREVEDHE+A VA+VSAGND  VG MIS+A++QVG
Sbjct: 137 GMNPIQISRGIEKTAMALVSELKLMSREVEDHELAHVAAVSAGNDYTVGNMISDAIRQVG 196

Query: 363 KRGVITIEKGNSADNTLQIVEGMQFERGFLSPYFVTDRRRMIVELQNCKLLLVDKIIKNP 542
           +RGVITIEKG  A+N+LQIVEGMQF+RG+LSPYFVTDR++M+VE  +CKLLLVDK I NP
Sbjct: 197 RRGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNP 256

Query: 543 KEM 551
           KEM
Sbjct: 257 KEM 259


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  294 bits (753), Expect = 5e-78
 Identities = 151/183 (82%), Positives = 169/183 (92%)
 Frame = +3

Query: 3   VNDGETVLKQIELEDHLENVGVKLVRQAGAKTNDLAGDGSTTSVLLAHGLIAEGVKVIAA 182
           VNDGETVLK+IELED LENVGVKLVRQAGAKTN LAGDGSTTSV+LA GLIAEGVKVIAA
Sbjct: 51  VNDGETVLKEIELEDPLENVGVKLVRQAGAKTNHLAGDGSTTSVILARGLIAEGVKVIAA 110

Query: 183 GMNPIQISRGIEKTSLALVSELKSMSREVEDHEIADVASVSAGNDPEVGKMISEALKQVG 362
           GMNPIQISRGIEKT++ALVSELK MSREVEDHE+A VA+VSAGND  VG MIS+A++QVG
Sbjct: 111 GMNPIQISRGIEKTAMALVSELKLMSREVEDHELAHVAAVSAGNDYTVGNMISDAIRQVG 170

Query: 363 KRGVITIEKGNSADNTLQIVEGMQFERGFLSPYFVTDRRRMIVELQNCKLLLVDKIIKNP 542
           +RGVITIEKG  A+N+LQIVEGMQF+RG+LSPYFVTDR++M+VE  +CKLLLVDK I NP
Sbjct: 171 RRGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNP 230

Query: 543 KEM 551
           KEM
Sbjct: 231 KEM 233


>ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4,
           chloroplastic-like [Cucumis sativus]
          Length = 597

 Score =  286 bits (732), Expect = 1e-75
 Identities = 145/183 (79%), Positives = 165/183 (90%)
 Frame = +3

Query: 3   VNDGETVLKQIELEDHLENVGVKLVRQAGAKTNDLAGDGSTTSVLLAHGLIAEGVKVIAA 182
           VNDGETVLK+IELED LENVGVKLVRQAGAKTNDLAGDGSTTSV+LA GLIAEG+KVIA+
Sbjct: 98  VNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSVVLAQGLIAEGMKVIAS 157

Query: 183 GMNPIQISRGIEKTSLALVSELKSMSREVEDHEIADVASVSAGNDPEVGKMISEALKQVG 362
           GMNP+QI+RGIEKT+ ALVSELK MSREVEDHEIA VA+VSAGND  VG ++S+A +QVG
Sbjct: 158 GMNPVQIARGIEKTAKALVSELKLMSREVEDHEIAHVAAVSAGNDYAVGSLVSDAFRQVG 217

Query: 363 KRGVITIEKGNSADNTLQIVEGMQFERGFLSPYFVTDRRRMIVELQNCKLLLVDKIIKNP 542
            +GV+ IEKG S DN+LQIVEGMQF+RG+LSPYFVTDRR+M+VE   CKLLLVDK I +P
Sbjct: 218 WKGVVQIEKGKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMVVEFHECKLLLVDKKISDP 277

Query: 543 KEM 551
           KEM
Sbjct: 278 KEM 280


>ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like
           [Cucumis sativus]
          Length = 597

 Score =  286 bits (732), Expect = 1e-75
 Identities = 145/183 (79%), Positives = 165/183 (90%)
 Frame = +3

Query: 3   VNDGETVLKQIELEDHLENVGVKLVRQAGAKTNDLAGDGSTTSVLLAHGLIAEGVKVIAA 182
           VNDGETVLK+IELED LENVGVKLVRQAGAKTNDLAGDGSTTSV+LA GLIAEG+KVIA+
Sbjct: 98  VNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSVVLAQGLIAEGMKVIAS 157

Query: 183 GMNPIQISRGIEKTSLALVSELKSMSREVEDHEIADVASVSAGNDPEVGKMISEALKQVG 362
           GMNP+QI+RGIEKT+ ALVSELK MSREVEDHEIA VA+VSAGND  VG ++S+A +QVG
Sbjct: 158 GMNPVQIARGIEKTAKALVSELKLMSREVEDHEIAHVAAVSAGNDYAVGSLVSDAFRQVG 217

Query: 363 KRGVITIEKGNSADNTLQIVEGMQFERGFLSPYFVTDRRRMIVELQNCKLLLVDKIIKNP 542
            +GV+ IEKG S DN+LQIVEGMQF+RG+LSPYFVTDRR+M+VE   CKLLLVDK I +P
Sbjct: 218 WKGVVQIEKGKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMVVEFHECKLLLVDKKISDP 277

Query: 543 KEM 551
           KEM
Sbjct: 278 KEM 280


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