BLASTX nr result
ID: Cnidium21_contig00036353
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00036353
(1008 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCH50966.1| T4.5 [Malus x robusta] 94 3e-23
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695... 93 2e-22
gb|ACF87376.2| unknown [Zea mays] 92 2e-22
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 92 5e-22
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 92 5e-22
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 93.6 bits (231), Expect(2) = 3e-23
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Frame = -3
Query: 928 HQEEGIDYYEIL--VCCQAYYRTVGNHSCHYFQMGMHHLDVKNAFRHGFLNGEACKRPFP 755
HQ+EG+D+ E V R + + + Y+ +H LDV NAF HG L + P
Sbjct: 1219 HQQEGLDFSETFSPVAKPTTIRILLSIAVSYYWF-IHQLDVSNAFLHGHLKEDVYMVQPP 1277
Query: 754 GFIVPSRLHYVCKLRKSINGLNKAPRT*FSRFENYLLSIDFKCSKNDTSMFILKHNRHIF 575
GF+ PS+ H+VCKLRKS+ GL +APR + F +LS+ F S +DTS+FI + F
Sbjct: 1278 GFVDPSKPHHVCKLRKSLYGLKQAPRAWYEAFYTAILSLGFSSSHSDTSLFIKRDTSITF 1337
Query: 574 ILLLQVDDVLSG*SCSRFYQIV 509
IL+ D +++G S + I+
Sbjct: 1338 ILVYVDDIIITGSSVTECQSII 1359
Score = 42.0 bits (97), Expect(2) = 3e-23
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -2
Query: 506 LLSMKDLGDLHYFLGIRVVNTSSGMLLSQHKYVLE 402
+ +KDLGD++YFLGI V + G+LL Q KY L+
Sbjct: 1365 MFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALD 1399
>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
putative protein [Arabidopsis thaliana]
Length = 1318
Score = 93.2 bits (230), Expect(2) = 2e-22
Identities = 55/129 (42%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = -3
Query: 925 QEEGIDYYEIL--VCCQAYYRTVGNHSCHYFQMGMHHLDVKNAFRHGFLNGEACKRPFPG 752
QEEGIDY E V R V H + +DVKNAF HG L G
Sbjct: 785 QEEGIDYLETYSPVVRTPTVRLV-LHLATALNWDIKQMDVKNAFLHGDLKETVYMTQPAG 843
Query: 751 FIVPSRLHYVCKLRKSINGLNKAPRT*FSRFENYLLSIDFKCSKNDTSMFILKHNRHIFI 572
F+ PS+ +VC L KSI GL ++PR F +F +LL F CSK+D S+FI HN ++ +
Sbjct: 844 FVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIYAHNNNLIL 903
Query: 571 LLLQVDDVL 545
LLL VDD++
Sbjct: 904 LLLYVDDMV 912
Score = 39.7 bits (91), Expect(2) = 2e-22
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -2
Query: 497 MKDLGDLHYFLGIRVVNTSSGMLLSQHKY 411
M D+G LHYFLGI+V +G+ +SQ KY
Sbjct: 934 MTDMGQLHYFLGIQVQRQQNGLFMSQQKY 962
>gb|ACF87376.2| unknown [Zea mays]
Length = 526
Score = 92.0 bits (227), Expect(2) = 2e-22
Identities = 59/129 (45%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Frame = -3
Query: 925 QEEGIDYYEIL--VCCQAYYRTVGNHSCHYFQMGMHHLDVKNAFRHGFLNGEACKRPFPG 752
Q+EGIDY E V R+V + + F +H LDVKNAF HG L+ +
Sbjct: 86 QQEGIDYGETFSPVIKPGTIRSVLSIATS-FSWPIHQLDVKNAFLHGTLSETVYSQQPSD 144
Query: 751 FIVPSRLHYVCKLRKSINGLNKAPRT*FSRFENYLLSIDFKCSKNDTSMFILKHNRHIFI 572
F+ PS H+VCKL KS+ GL +APRT F RF +L SI F SK D S+FILK
Sbjct: 145 FVDPSLPHHVCKLHKSLYGLKQAPRTWFLRFTTFLSSIGFTQSKCDPSLFILKTPSTTAY 204
Query: 571 LLLQVDDVL 545
LLL VDD++
Sbjct: 205 LLLYVDDII 213
Score = 40.8 bits (94), Expect(2) = 2e-22
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = -2
Query: 512 CCLLSMKDLGDLHYFLGIRVVNTSSGMLLSQHKYVLE 402
C SM DLG L +FLGI V + +G++LSQ +Y L+
Sbjct: 230 CSEFSMSDLGPLRHFLGIEVTPSDTGLVLSQKQYALD 266
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 91.7 bits (226), Expect(2) = 5e-22
Identities = 55/129 (42%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = -3
Query: 925 QEEGIDYYEIL--VCCQAYYRTVGNHSCHYFQMGMHHLDVKNAFRHGFLNGEACKRPFPG 752
QEEG+DY E V A R++ H + + LDVKNAF H L PG
Sbjct: 991 QEEGVDYVETYSPVVRSATVRSI-LHVATINKWSLKQLDVKNAFLHDELKETVFMTQPPG 1049
Query: 751 FIVPSRLHYVCKLRKSINGLNKAPRT*FSRFENYLLSIDFKCSKNDTSMFILKHNRHIFI 572
F PSR YVCKL+K+I L +APR F +F +YLL F CS +D S+F+ R +
Sbjct: 1050 FEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVYLKGRDVMF 1109
Query: 571 LLLQVDDVL 545
LLL VDD++
Sbjct: 1110 LLLYVDDMI 1118
Score = 39.7 bits (91), Expect(2) = 5e-22
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = -2
Query: 497 MKDLGDLHYFLGIRVVNTSSGMLLSQHKY----VLESGSSSPVSLAT 369
MKD+G LHYFLGI+ + G+ LSQ KY ++ +G S S+ T
Sbjct: 1140 MKDMGALHYFLGIQAHYHNDGLFLSQEKYTSDLLVNAGMSDCSSMPT 1186
>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
Length = 1392
Score = 91.7 bits (226), Expect(2) = 5e-22
Identities = 55/129 (42%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = -3
Query: 925 QEEGIDYYEIL--VCCQAYYRTVGNHSCHYFQMGMHHLDVKNAFRHGFLNGEACKRPFPG 752
QEEG+DY E V A R++ H + + LDVKNAF H L PG
Sbjct: 868 QEEGVDYVETYSPVVRSATVRSI-LHVATINKWSLKQLDVKNAFLHDELKETVFMTQPPG 926
Query: 751 FIVPSRLHYVCKLRKSINGLNKAPRT*FSRFENYLLSIDFKCSKNDTSMFILKHNRHIFI 572
F PSR YVCKL+K+I L +APR F +F +YLL F CS +D S+F+ R +
Sbjct: 927 FEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFSDPSLFVYLKGRDVMF 986
Query: 571 LLLQVDDVL 545
LLL VDD++
Sbjct: 987 LLLYVDDMI 995
Score = 39.7 bits (91), Expect(2) = 5e-22
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = -2
Query: 497 MKDLGDLHYFLGIRVVNTSSGMLLSQHKY----VLESGSSSPVSLAT 369
MKD+G LHYFLGI+ + G+ LSQ KY ++ +G S S+ T
Sbjct: 1017 MKDMGALHYFLGIQAHYHNDGLFLSQEKYTSDLLVNAGMSDCSSMPT 1063