BLASTX nr result

ID: Cnidium21_contig00036351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036351
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004174048.1| PREDICTED: mediator-associated protein 1-lik...    79   6e-13
ref|XP_004144578.1| PREDICTED: mediator-associated protein 1-lik...    79   6e-13
ref|XP_002886513.1| hypothetical protein ARALYDRAFT_475156 [Arab...    68   8e-10
ref|XP_003635491.1| PREDICTED: uncharacterized protein LOC100854...    65   5e-09
ref|NP_567161.1| DNA-binding storekeeper protein-related transcr...    65   7e-09

>ref|XP_004174048.1| PREDICTED: mediator-associated protein 1-like, partial [Cucumis
           sativus]
          Length = 261

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 11/106 (10%)
 Frame = +1

Query: 91  KASGSGV---WSEEDEVSLLKAMIDYEVIKQSNPYDDMGKFLHFVKPLIAFDVQRKQLTD 261
           K SGSG+   WSE+DE+S+L+ MID+E+ K S+PY DM +FL F+K  ++ DV + QL D
Sbjct: 32  KVSGSGINRLWSEDDEISILQGMIDFELAKGSDPYTDMNQFLDFIKENLSVDVSKNQLID 91

Query: 262 KLWVLKKKFLNSKYDSS-------IPRHA-KLLELSKSIKCWGQHA 375
           K+  LKKK+ N+            + +H  K   LSK  K WG  A
Sbjct: 92  KVRRLKKKYKNNSEKGRNGDDPVFLKQHEHKSFVLSK--KIWGNEA 135


>ref|XP_004144578.1| PREDICTED: mediator-associated protein 1-like [Cucumis sativus]
          Length = 324

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 11/106 (10%)
 Frame = +1

Query: 91  KASGSGV---WSEEDEVSLLKAMIDYEVIKQSNPYDDMGKFLHFVKPLIAFDVQRKQLTD 261
           K SGSG+   WSE+DE+S+L+ MID+E+ K S+PY DM +FL F+K  ++ DV + QL D
Sbjct: 86  KVSGSGINRLWSEDDEISILQGMIDFELAKGSDPYTDMNQFLDFIKENLSVDVSKNQLID 145

Query: 262 KLWVLKKKFLNSKYDSS-------IPRHA-KLLELSKSIKCWGQHA 375
           K+  LKKK+ N+            + +H  K   LSK  K WG  A
Sbjct: 146 KVRRLKKKYKNNSEKGRNGDDPVFLKQHEHKSFVLSK--KIWGNEA 189


>ref|XP_002886513.1| hypothetical protein ARALYDRAFT_475156 [Arabidopsis lyrata subsp.
           lyrata] gi|297332354|gb|EFH62772.1| hypothetical protein
           ARALYDRAFT_475156 [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
 Frame = +1

Query: 109 VWSEEDEVSLLKAMIDYEVIKQSNPYDDMGKFLHFVKPLIAFDVQRKQLTDKLWVLKKKF 288
           +WSEEDE+S+L+ MID++     +PY+D   F  F+K  I+F+V + Q  DK+  L+KK+
Sbjct: 157 LWSEEDEISVLQGMIDFKADTGKSPYEDSNAFYEFLKKSISFEVSKNQFMDKIRSLRKKY 216

Query: 289 L--NSKYDSSIPRH-AKLLELSKSIKCWG 366
           +    K  S +  H  K  ELSK I  WG
Sbjct: 217 IGKEGKEPSFVKAHDKKAFELSKFI--WG 243


>ref|XP_003635491.1| PREDICTED: uncharacterized protein LOC100854363 isoform 1 [Vitis
           vinifera] gi|359497354|ref|XP_003635492.1| PREDICTED:
           uncharacterized protein LOC100854363 isoform 2 [Vitis
           vinifera] gi|296086994|emb|CBI33256.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
 Frame = +1

Query: 109 VWSEEDEVSLLKAMIDYEVIKQSNPY--DDMGKFLHFVKPLIAFDVQRKQLTDKLWVLKK 282
           +WSEEDE+ +LK MIDY     S PY   DM +F  FVK  +  D  R QLTDK   LKK
Sbjct: 206 IWSEEDELGILKGMIDYSAKNGSVPYPNGDMNEFYDFVKNTLHGDFSRVQLTDKARRLKK 265

Query: 283 KFLNSKYDSSI--------PRHAKLLELSKSIKCWG 366
           K+ N+   + +        P   +  ELSK  K WG
Sbjct: 266 KYSNNVSRAKLGEDPTFQKPHEQRAFELSK--KIWG 299


>ref|NP_567161.1| DNA-binding storekeeper protein-related transcriptional regulator
           [Arabidopsis thaliana]
           gi|6049875|gb|AAF02790.1|AF195115_10 F5I10.12 gene
           product [Arabidopsis thaliana] gi|2252833|gb|AAB62832.1|
           A_IG005I10.12 gene product [Arabidopsis thaliana]
           gi|7267112|emb|CAB80783.1| AT4g00250 [Arabidopsis
           thaliana] gi|28393146|gb|AAO42006.1| unknown protein
           [Arabidopsis thaliana] gi|28973523|gb|AAO64086.1|
           unknown protein [Arabidopsis thaliana]
           gi|332656446|gb|AEE81846.1| DNA-binding storekeeper
           protein-related transcriptional regulator [Arabidopsis
           thaliana]
          Length = 319

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
 Frame = +1

Query: 91  KASGSGVWSEEDEVSLLKAMIDYEVIKQSNPYDDMGKFLHFVKPLIAFDVQRKQLTDKLW 270
           KA+   VWSEEDE+SLL+A+ID++    ++P+D    F    K  I+FDV   Q  DK+ 
Sbjct: 112 KANPQRVWSEEDEISLLQAVIDFKAETGTSPWDHKNAFFDIAKKSISFDVSHVQFFDKIR 171

Query: 271 VLKKK-FLNSKYDSSIPRHAKLLELSKSIKCWG 366
            LK K F+N K  S    H K   L  ++  WG
Sbjct: 172 RLKNKYFVNRKNKSGESNHDKKC-LGLAVLIWG 203


Top