BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036307
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   293   1e-77
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   292   3e-77
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         291   5e-77
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   291   5e-77
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         290   9e-77

>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  293 bits (750), Expect = 1e-77
 Identities = 139/193 (72%), Positives = 165/193 (85%)
 Frame = +1

Query: 1    WVYKKKLNAQGEVEKYKARLVAKGYKQRYGIDYDEVFAPVARMETIRLLISQAAQNKWPI 180
            WVYK K N++GEVE+YKARLVAKGY QR GIDYDEVFAPVAR+ET+RL+IS AAQNKW I
Sbjct: 851  WVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKI 910

Query: 181  YQMDVKSAFLNGMLEEEVYVNQPPGYVKTGKEGLVLKLYKALYGLKQAPRAWNTRIDAYF 360
            +QMDVKSAFLNG LEEEVY+ QP GY+  G+E  VL+L KALYGLKQAPRAWNTRID YF
Sbjct: 911  HQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYF 970

Query: 361  KKNGFVQCPYEAALYVKERQGKLLLVALYVDDLIFMGNDEEMIKDFKKEMTQEFEMTDLG 540
            K+  F++CPYE ALY+K ++  +L+  LYVDDLIF GN+  M ++FKKEMT+EFEMTD+G
Sbjct: 971  KEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 1030

Query: 541  LMRYFLGIEVKQD 579
            LM Y+LGIEVKQ+
Sbjct: 1031 LMSYYLGIEVKQE 1043


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  292 bits (747), Expect = 3e-77
 Identities = 139/193 (72%), Positives = 165/193 (85%)
 Frame = +1

Query: 1    WVYKKKLNAQGEVEKYKARLVAKGYKQRYGIDYDEVFAPVARMETIRLLISQAAQNKWPI 180
            WVYK K N++GEVE+YKARLVAKGY QR GIDYDEVFAPVAR+ET+RL+IS AAQNKW I
Sbjct: 883  WVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKI 942

Query: 181  YQMDVKSAFLNGMLEEEVYVNQPPGYVKTGKEGLVLKLYKALYGLKQAPRAWNTRIDAYF 360
            +QMDVKSAFLNG LEEEVY+ QP GY+  G+E  VL+L KALYGLKQAPRAWNTRID YF
Sbjct: 943  HQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYF 1002

Query: 361  KKNGFVQCPYEAALYVKERQGKLLLVALYVDDLIFMGNDEEMIKDFKKEMTQEFEMTDLG 540
            K+  F++CPYE ALY+K ++  +L+  LYVDDLIF GN+  M ++FKKEMT+EFEMTD+G
Sbjct: 1003 KEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 1062

Query: 541  LMRYFLGIEVKQD 579
            LM Y+LGIEVKQ+
Sbjct: 1063 LMSYYLGIEVKQE 1075


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  291 bits (745), Expect = 5e-77
 Identities = 137/193 (70%), Positives = 164/193 (84%)
 Frame = +1

Query: 1   WVYKKKLNAQGEVEKYKARLVAKGYKQRYGIDYDEVFAPVARMETIRLLISQAAQNKWPI 180
           WVYK K N++GEVE+YKARLVAKGY QR GIDYDE+FAPVAR+ET+RL+IS AAQNKW I
Sbjct: 380 WVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKI 439

Query: 181 YQMDVKSAFLNGMLEEEVYVNQPPGYVKTGKEGLVLKLYKALYGLKQAPRAWNTRIDAYF 360
           +QMDVKSAFLNG LEEEVY+ QP GY+  G+E  VL+L K LYGLKQAPRAWNTRID YF
Sbjct: 440 HQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYF 499

Query: 361 KKNGFVQCPYEAALYVKERQGKLLLVALYVDDLIFMGNDEEMIKDFKKEMTQEFEMTDLG 540
           K+  F++CPYE ALY+K ++  +L+  LYVDDLIF GN+  M ++FKKEMT+EFEMTD+G
Sbjct: 500 KEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 559

Query: 541 LMRYFLGIEVKQD 579
           LM Y+LGIEVKQ+
Sbjct: 560 LMSYYLGIEVKQE 572


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  291 bits (745), Expect = 5e-77
 Identities = 137/193 (70%), Positives = 164/193 (84%)
 Frame = +1

Query: 1    WVYKKKLNAQGEVEKYKARLVAKGYKQRYGIDYDEVFAPVARMETIRLLISQAAQNKWPI 180
            WVYK K N++GEVE+YKARLVAKGY QR GIDYDE+FAPVAR+ET+RL+IS AAQNKW I
Sbjct: 883  WVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKI 942

Query: 181  YQMDVKSAFLNGMLEEEVYVNQPPGYVKTGKEGLVLKLYKALYGLKQAPRAWNTRIDAYF 360
            +QMDVKSAFLNG LEEEVY+ QP GY+  G+E  VL+L K LYGLKQAPRAWNTRID YF
Sbjct: 943  HQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYF 1002

Query: 361  KKNGFVQCPYEAALYVKERQGKLLLVALYVDDLIFMGNDEEMIKDFKKEMTQEFEMTDLG 540
            K+  F++CPYE ALY+K ++  +L+  LYVDDLIF GN+  M ++FKKEMT+EFEMTD+G
Sbjct: 1003 KEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 1062

Query: 541  LMRYFLGIEVKQD 579
            LM Y+LGIEVKQ+
Sbjct: 1063 LMSYYLGIEVKQE 1075


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  290 bits (743), Expect = 9e-77
 Identities = 137/193 (70%), Positives = 164/193 (84%)
 Frame = +1

Query: 1    WVYKKKLNAQGEVEKYKARLVAKGYKQRYGIDYDEVFAPVARMETIRLLISQAAQNKWPI 180
            WVYK K N++GEVE+YKARLVAKGY QR GIDYDEVFAPVAR+ET+RL+IS AAQNKW I
Sbjct: 883  WVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKI 942

Query: 181  YQMDVKSAFLNGMLEEEVYVNQPPGYVKTGKEGLVLKLYKALYGLKQAPRAWNTRIDAYF 360
            +QMDVKSAFLNG LEEEVY+ QP GY+  G+E  VL+L K LYGLKQAPRAWNTRID YF
Sbjct: 943  HQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYF 1002

Query: 361  KKNGFVQCPYEAALYVKERQGKLLLVALYVDDLIFMGNDEEMIKDFKKEMTQEFEMTDLG 540
            K+  F++CPYE ALY+K ++  +L+  LYVDDLIF GN+  + ++FKKEMT+EFEMTD+G
Sbjct: 1003 KEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIG 1062

Query: 541  LMRYFLGIEVKQD 579
            LM Y+LGIEVKQ+
Sbjct: 1063 LMSYYLGIEVKQE 1075