BLASTX nr result

ID: Cnidium21_contig00036306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036306
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633861.1| PREDICTED: putative vacuolar protein sorting...   260   1e-67
ref|NP_001190387.1| uncharacterized protein [Arabidopsis thalian...   214   9e-54
ref|XP_003541522.1| PREDICTED: uncharacterized protein LOC100783...   201   1e-49
ref|NP_568451.7| uncharacterized protein [Arabidopsis thaliana] ...   195   6e-48
ref|NP_001060855.1| Os08g0116700 [Oryza sativa Japonica Group] g...   194   1e-47

>ref|XP_003633861.1| PREDICTED: putative vacuolar protein sorting-associated protein
           13F-like [Vitis vinifera]
          Length = 355

 Score =  260 bits (665), Expect = 1e-67
 Identities = 136/220 (61%), Positives = 166/220 (75%), Gaps = 2/220 (0%)
 Frame = -3

Query: 660 SFITAKILDGIQVSIRNVHVLYRDMLTDGARAEFGLKFSSLTLMKQNPAGVSSGKARGNQ 481
           S+ITAKILDGIQVSIRNVHVLYRD+  D A   FGL+FS+LT+MKQNP G  +GK RG Q
Sbjct: 137 SYITAKILDGIQVSIRNVHVLYRDVQNDSAHIAFGLRFSALTIMKQNPVGSFNGKVRGGQ 196

Query: 480 VAKLVEVQSLEIYCRTFQGTPDGIRIGSGGTEFVDSGKYLHEGHIN--VLNPVDVSMSLL 307
           V K VE+  LEIYC T QGT   I I       +     L EG+ N  +L P DVSM+LL
Sbjct: 197 VNKTVEILGLEIYCSTSQGTLSLIAIDDAADSKLGGDARL-EGNKNDYILAPFDVSMTLL 255

Query: 306 VNRPGKLESDAPQYSIDFKLTGLVISLDEMQLQEILNLFDYLSTCRLRERYGQYRPWASP 127
           VNR GKLE+DAPQYSI+ +LT LV+SLDE+QLQ+IL+L DYL T RLRE+YG+YRP ++ 
Sbjct: 256 VNRSGKLENDAPQYSINAELTSLVMSLDEVQLQQILSLCDYLCTSRLREKYGRYRPSSNL 315

Query: 126 LSKKLKGWQIVWWQYAQQSVFSDVCKRLRKTSWKYLGERL 7
           LS+K++GWQ +WW YAQ SV SDV K+L++TSW Y G+RL
Sbjct: 316 LSRKVEGWQKMWWHYAQASVLSDVRKKLKRTSWTYFGQRL 355


>ref|NP_001190387.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332005970|gb|AED93353.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 389

 Score =  214 bits (546), Expect = 9e-54
 Identities = 112/219 (51%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
 Frame = -3

Query: 660 SFITAKILDGIQVSIRNVHVLYRDMLTDGARAEFGLKFSSLTLMKQNPAGVSSGKARGNQ 481
           S+ITAKILD +QVSI+N H+LY D   +  +   GL+FSSLT+ KQN  G S G+ RG Q
Sbjct: 140 SYITAKILDSVQVSIKNFHILYSDAQPESGQVVLGLRFSSLTVTKQNSVGPSVGRVRGGQ 199

Query: 480 VAKLVEVQSLEIYCRTFQGTPDGIRIGSG-GTEFVDSGKYLHEGHINVLNPVDVSMSLLV 304
           V  LVEV+ LEIYC  ++G  D   +    G +     +        +L PV VS++LLV
Sbjct: 200 VNILVEVEGLEIYCDMYEGNMDFPSVNEKIGFDNWCQSRLQSNRFGYLLKPVHVSVTLLV 259

Query: 303 NRPGKLESDAPQYSIDFKLTGLVISLDEMQLQEILNLFDYLSTCRLRERYGQYRPWASPL 124
           NR G+L  D PQYSI  +LT +V++L+E QLQ+IL L DYL T +LRERYG+YRP ++ L
Sbjct: 260 NRSGELYDDLPQYSISAELTDVVVTLNEFQLQQILILLDYLQTSQLRERYGRYRPCSTSL 319

Query: 123 SKKLKGWQIVWWQYAQQSVFSDVCKRLRKTSWKYLGERL 7
           S+K  GWQ +WW YAQ SV SDV K+L KTSW++L +R+
Sbjct: 320 SRKPPGWQKLWWHYAQNSVLSDVRKKLWKTSWRFLEQRM 358


>ref|XP_003541522.1| PREDICTED: uncharacterized protein LOC100783352 [Glycine max]
          Length = 3441

 Score =  201 bits (510), Expect = 1e-49
 Identities = 109/219 (49%), Positives = 136/219 (62%)
 Frame = -3

Query: 660 SFITAKILDGIQVSIRNVHVLYRDMLTDGARAEFGLKFSSLTLMKQNPAGVSSGKARGNQ 481
           S +T KILD IQV IRN HVLY DM  D     FGLKF+SLT MKQN  G S+G+ R  Q
Sbjct: 134 SHVTTKILDSIQVDIRNFHVLYCDMQNDLGHIMFGLKFTSLT-MKQNLIGSSNGRVRVGQ 192

Query: 480 VAKLVEVQSLEIYCRTFQGTPDGIRIGSGGTEFVDSGKYLHEGHINVLNPVDVSMSLLVN 301
             K+VEV+ LE Y R F G+ D                                   L N
Sbjct: 193 EHKIVEVKGLEFYSRMFHGSMD-----------------------------------LDN 217

Query: 300 RPGKLESDAPQYSIDFKLTGLVISLDEMQLQEILNLFDYLSTCRLRERYGQYRPWASPLS 121
           R  KL+ + PQYS+  +L+GLVISLDE+QLQ +  ++DY+ TCRLRERYG++RPW   L 
Sbjct: 218 RLQKLDDNTPQYSVTAELSGLVISLDEVQLQHMCLVWDYICTCRLRERYGRFRPWHCLLP 277

Query: 120 KKLKGWQIVWWQYAQQSVFSDVCKRLRKTSWKYLGERLS 4
           +K +GWQI WW YAQ+SV SDV ++L+KTSW+YLG+RLS
Sbjct: 278 RKCEGWQIFWWHYAQESVLSDVRRKLKKTSWRYLGDRLS 316


>ref|NP_568451.7| uncharacterized protein [Arabidopsis thaliana]
           gi|332005969|gb|AED93352.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 3464

 Score =  195 bits (496), Expect = 6e-48
 Identities = 103/202 (50%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
 Frame = -3

Query: 660 SFITAKILDGIQVSIRNVHVLYRDMLTDGARAEFGLKFSSLTLMKQNPAGVSSGKARGNQ 481
           S+ITAKILD +QVSI+N H+LY D   +  +   GL+FSSLT+ KQN  G S G+ RG Q
Sbjct: 140 SYITAKILDSVQVSIKNFHILYSDAQPESGQVVLGLRFSSLTVTKQNSVGPSVGRVRGGQ 199

Query: 480 VAKLVEVQSLEIYCRTFQGTPDGIRIGSG-GTEFVDSGKYLHEGHINVLNPVDVSMSLLV 304
           V  LVEV+ LEIYC  ++G  D   +    G +     +        +L PV VS++LLV
Sbjct: 200 VNILVEVEGLEIYCDMYEGNMDFPSVNEKIGFDNWCQSRLQSNRFGYLLKPVHVSVTLLV 259

Query: 303 NRPGKLESDAPQYSIDFKLTGLVISLDEMQLQEILNLFDYLSTCRLRERYGQYRPWASPL 124
           NR G+L  D PQYSI  +LT +V++L+E QLQ+IL L DYL T +LRERYG+YRP ++ L
Sbjct: 260 NRSGELYDDLPQYSISAELTDVVVTLNEFQLQQILILLDYLQTSQLRERYGRYRPCSTSL 319

Query: 123 SKKLKGWQIVWWQYAQQSVFSD 58
           S+K  GWQ +WW YAQ SV SD
Sbjct: 320 SRKPPGWQKLWWHYAQNSVLSD 341


>ref|NP_001060855.1| Os08g0116700 [Oryza sativa Japonica Group]
           gi|50725626|dbj|BAD33093.1| VPS13-like protein [Oryza
           sativa Japonica Group] gi|113622824|dbj|BAF22769.1|
           Os08g0116700 [Oryza sativa Japonica Group]
          Length = 539

 Score =  194 bits (494), Expect = 1e-47
 Identities = 110/228 (48%), Positives = 149/228 (65%), Gaps = 10/228 (4%)
 Frame = -3

Query: 660 SFITAKILDGIQVSIRNVHVLYRDMLTDGARAEFGLKFSSLTLM----KQNPAGVSSGKA 493
           S+I AKILD IQVSIRNVH+ Y D   D     FGL+FSSL++     KQ+ A      +
Sbjct: 136 SYILAKILDNIQVSIRNVHITYADNYKDQGNFMFGLEFSSLSIQTDPKKQSFAMSLMVMS 195

Query: 492 RGNQVAKLVEVQSLEIYCRTF---QGTPDGIRIGSGG---TEFVDSGKYLHEGHINVLNP 331
           R ++V K VE+ ++ IYC      QG+ D     +GG   T F  S +  H     +LNP
Sbjct: 196 RQDEVNKTVEISNVGIYCHHLDEQQGSCD-----TGGLTETNFSFSHELAHPRDAYLLNP 250

Query: 330 VDVSMSLLVNRPGKLESDAPQYSIDFKLTGLVISLDEMQLQEILNLFDYLSTCRLRERYG 151
            +V++ +L N+ GKL+  AP+Y+I  +LT L++S+DE+Q+Q+ILNL DY S C LR +YG
Sbjct: 251 FNVTIFVLANKAGKLDG-APRYNITVELTALILSIDEIQIQQILNLCDYFSICALRTKYG 309

Query: 150 QYRPWASPLSKKLKGWQIVWWQYAQQSVFSDVCKRLRKTSWKYLGERL 7
           +YRP  S LSK+ KGWQ +WW YAQ+SV +DV + LRKTSW YLG+RL
Sbjct: 310 RYRPSQSSLSKRHKGWQRMWWHYAQRSVLADVRRELRKTSWNYLGQRL 357


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