BLASTX nr result

ID: Cnidium21_contig00036297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036297
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78654.1| pectate lyase [Populus tomentosa]                      214   9e-57
ref|XP_002304700.1| predicted protein [Populus trichocarpa] gi|1...   214   9e-57
gb|ACB12931.1| pectate lyase 1-27 [Populus tremula x Populus tre...   214   1e-56
ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|1...   214   1e-56
ref|XP_003638493.1| Pectate lyase [Medicago truncatula] gi|35550...   214   3e-56

>gb|AFZ78654.1| pectate lyase [Populus tomentosa]
          Length = 452

 Score =  214 bits (546), Expect(2) = 9e-57
 Identities = 99/109 (90%), Positives = 104/109 (95%)
 Frame = +2

Query: 2   SLSNCPDGLVDAIMGSTAITISNNYFTHHNEVILLGHSDSYTRDKQMQVTIAFNHFGEGL 181
           SLSNC DGLVDA+MGSTAIT+SNN+FTHHNEV+LLGHSDSYTRDKQMQVTIA+NHFGEGL
Sbjct: 268 SLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGL 327

Query: 182 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAP**PF 328
           IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRY AP  PF
Sbjct: 328 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYNAPANPF 376



 Score = 30.8 bits (68), Expect(2) = 9e-57
 Identities = 14/19 (73%), Positives = 16/19 (84%), Gaps = 2/19 (10%)
 Frame = +3

Query: 321 NPFAKEVTKRLET--GAWK 371
           NPFAKEVTKR++T  G WK
Sbjct: 374 NPFAKEVTKRVDTAPGKWK 392


>ref|XP_002304700.1| predicted protein [Populus trichocarpa] gi|118488323|gb|ABK95980.1|
           unknown [Populus trichocarpa]
           gi|222842132|gb|EEE79679.1| predicted protein [Populus
           trichocarpa]
          Length = 452

 Score =  214 bits (546), Expect(2) = 9e-57
 Identities = 99/109 (90%), Positives = 104/109 (95%)
 Frame = +2

Query: 2   SLSNCPDGLVDAIMGSTAITISNNYFTHHNEVILLGHSDSYTRDKQMQVTIAFNHFGEGL 181
           SLSNC DGLVDA+MGSTAIT+SNN+FTHHNEV+LLGHSDSYTRDKQMQVTIA+NHFGEGL
Sbjct: 268 SLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGL 327

Query: 182 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAP**PF 328
           IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRY AP  PF
Sbjct: 328 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYNAPANPF 376



 Score = 30.8 bits (68), Expect(2) = 9e-57
 Identities = 14/19 (73%), Positives = 16/19 (84%), Gaps = 2/19 (10%)
 Frame = +3

Query: 321 NPFAKEVTKRLET--GAWK 371
           NPFAKEVTKR++T  G WK
Sbjct: 374 NPFAKEVTKRVDTAPGKWK 392


>gb|ACB12931.1| pectate lyase 1-27 [Populus tremula x Populus tremuloides]
          Length = 452

 Score =  214 bits (546), Expect(2) = 1e-56
 Identities = 99/109 (90%), Positives = 104/109 (95%)
 Frame = +2

Query: 2   SLSNCPDGLVDAIMGSTAITISNNYFTHHNEVILLGHSDSYTRDKQMQVTIAFNHFGEGL 181
           SLSNC DGLVDA+MGSTAIT+SNN+FTHHNEV+LLGHSDSYTRDKQMQVTIA+NHFGEGL
Sbjct: 268 SLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGL 327

Query: 182 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAP**PF 328
           IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRY AP  PF
Sbjct: 328 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYNAPANPF 376



 Score = 30.4 bits (67), Expect(2) = 1e-56
 Identities = 14/19 (73%), Positives = 16/19 (84%), Gaps = 2/19 (10%)
 Frame = +3

Query: 321 NPFAKEVTKRLET--GAWK 371
           NPFAKEVTKR++T  G WK
Sbjct: 374 NPFAKEVTKRVDTAPGNWK 392


>ref|XP_002297822.1| predicted protein [Populus trichocarpa] gi|118488789|gb|ABK96205.1|
           unknown [Populus trichocarpa]
           gi|222845080|gb|EEE82627.1| predicted protein [Populus
           trichocarpa]
          Length = 450

 Score =  214 bits (546), Expect(2) = 1e-56
 Identities = 99/109 (90%), Positives = 104/109 (95%)
 Frame = +2

Query: 2   SLSNCPDGLVDAIMGSTAITISNNYFTHHNEVILLGHSDSYTRDKQMQVTIAFNHFGEGL 181
           SLSNC DGLVDA+MGSTAIT+SNN+FTHHNEV+LLGHSDSYTRDKQMQVTIA+NHFGEGL
Sbjct: 266 SLSNCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGL 325

Query: 182 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAP**PF 328
           IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRY AP  PF
Sbjct: 326 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYNAPVNPF 374



 Score = 30.4 bits (67), Expect(2) = 1e-56
 Identities = 14/19 (73%), Positives = 16/19 (84%), Gaps = 2/19 (10%)
 Frame = +3

Query: 321 NPFAKEVTKRLET--GAWK 371
           NPFAKEVTKR++T  G WK
Sbjct: 372 NPFAKEVTKRVDTAAGYWK 390


>ref|XP_003638493.1| Pectate lyase [Medicago truncatula] gi|355504428|gb|AES85631.1|
           Pectate lyase [Medicago truncatula]
          Length = 218

 Score =  214 bits (545), Expect(2) = 3e-56
 Identities = 100/109 (91%), Positives = 104/109 (95%)
 Frame = +2

Query: 2   SLSNCPDGLVDAIMGSTAITISNNYFTHHNEVILLGHSDSYTRDKQMQVTIAFNHFGEGL 181
           SLS+C DGLVDA+MGSTAITISNN+FTHHNEVILLGHSDSYTRDKQMQVTIA+NHFGEGL
Sbjct: 34  SLSHCADGLVDAVMGSTAITISNNHFTHHNEVILLGHSDSYTRDKQMQVTIAYNHFGEGL 93

Query: 182 IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAP**PF 328
           IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRY AP  PF
Sbjct: 94  IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYNAPVNPF 142



 Score = 29.6 bits (65), Expect(2) = 3e-56
 Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
 Frame = +3

Query: 321 NPFAKEVTKRLETG--AWK 371
           NPFAKEVTKR+ET    WK
Sbjct: 140 NPFAKEVTKRVETAETQWK 158


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