BLASTX nr result

ID: Cnidium21_contig00036292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036292
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    74   5e-11
ref|XP_003626023.1| Replication factor A protein [Medicago trunc...    72   1e-10
ref|XP_003605522.1| Replication protein A1-like protein [Medicag...    69   1e-09
ref|XP_003605543.1| Replication protein A1-like protein [Medicag...    69   2e-09
ref|XP_003605520.1| Replication protein A1-like protein [Medicag...    69   2e-09

>ref|XP_003629182.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355523204|gb|AET03658.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 604

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 36/117 (30%), Positives = 66/117 (56%)
 Frame = +1

Query: 349 VEETNNWWYLSCTSTKCNEKIITVEGKIRCPKCQKNFPVAEKRYRIVVLAEDETEAYNFV 528
           +E+  NW+Y +CT  KC  ++ T+ G++ CPKC      A  R+++ +   D T + +F+
Sbjct: 298 IEKEFNWYYQACT--KCAGRVKTIAGRLFCPKCNTGRN-AVPRFKVHLQVMDNTGSTSFI 354

Query: 529 LLDRTAKRIIGKTVTKLIADKIQNASSKEYPPKIKEIAGKYLTLKIQLNDENIQLHN 699
           L DR     +GK+V  LI  + Q  ++ ++P +     GK +  K+++ + NI +HN
Sbjct: 355 LFDRNVSNYVGKSVQDLIQQQAQQKNADDFPAEFDTFYGKQMLFKVEVAEGNI-VHN 410


>ref|XP_003626023.1| Replication factor A protein [Medicago truncatula]
           gi|355501038|gb|AES82241.1| Replication factor A protein
           [Medicago truncatula]
          Length = 526

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 36/115 (31%), Positives = 64/115 (55%)
 Frame = +1

Query: 349 VEETNNWWYLSCTSTKCNEKIITVEGKIRCPKCQKNFPVAEKRYRIVVLAEDETEAYNFV 528
           +E   +W+Y +CT  KC  +I  + G++ CP+C ++   A  R+++ V   D T + +F+
Sbjct: 298 IEAEYSWYYDACT--KCAGRIKIIAGRMFCPRCNQSRN-AVPRFKLHVQVMDNTGSTSFI 354

Query: 529 LLDRTAKRIIGKTVTKLIADKIQNASSKEYPPKIKEIAGKYLTLKIQLNDENIQL 693
           L DR     +GK+V  LI  + Q  + K YP  +  + GK +  K+++ D N+ L
Sbjct: 355 LFDRNVSNYVGKSVQDLIDSQGQGNNDKGYPSDLDVLVGKKMLFKVEITDGNLHL 409


>ref|XP_003605522.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355506577|gb|AES87719.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 596

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 37/117 (31%), Positives = 66/117 (56%)
 Frame = +1

Query: 349 VEETNNWWYLSCTSTKCNEKIITVEGKIRCPKCQKNFPVAEKRYRIVVLAEDETEAYNFV 528
           +E    W+Y +CT  KC  +I  V G++ CP+C+++  V   R+++ V   D T + +F+
Sbjct: 352 IEPEYGWYYDACT--KCAGRITIVAGRMFCPRCKQSRNVVP-RFKLHVQVMDTTGSTSFI 408

Query: 529 LLDRTAKRIIGKTVTKLIADKIQNASSKEYPPKIKEIAGKYLTLKIQLNDENIQLHN 699
           L DR     +G++V  LI  + Q  +S  YP  ++ + GK +  K+ + + N+ LHN
Sbjct: 409 LFDRNVSNYVGRSVQDLIDAQGQGDNSLGYPADLEVLVGKKMLFKVDITNGNL-LHN 464


>ref|XP_003605543.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355506598|gb|AES87740.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 378

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 37/117 (31%), Positives = 66/117 (56%)
 Frame = +1

Query: 349 VEETNNWWYLSCTSTKCNEKIITVEGKIRCPKCQKNFPVAEKRYRIVVLAEDETEAYNFV 528
           +E    W+Y +CT  KC  +I  V G++ CP+C+++   A  R+++ V   D T + +F+
Sbjct: 134 IEPEYGWYYDACT--KCAGRITIVAGRMFCPRCKQSRN-AVPRFKLHVQVMDTTGSTSFI 190

Query: 529 LLDRTAKRIIGKTVTKLIADKIQNASSKEYPPKIKEIAGKYLTLKIQLNDENIQLHN 699
           L DR     +G++V  LI  + Q  +S  YP  ++ + GK +  K+ + + N+ LHN
Sbjct: 191 LFDRNVSNYVGRSVQDLIDAQGQGDNSLGYPADLEVLVGKKMLFKVDITNGNL-LHN 246


>ref|XP_003605520.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355506575|gb|AES87717.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 596

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 37/117 (31%), Positives = 66/117 (56%)
 Frame = +1

Query: 349 VEETNNWWYLSCTSTKCNEKIITVEGKIRCPKCQKNFPVAEKRYRIVVLAEDETEAYNFV 528
           +E    W+Y +CT  KC  +I  V G++ CP+C+++   A  R+++ V   D T + +F+
Sbjct: 352 IEPEYGWYYDACT--KCAGRITIVAGRMFCPRCKQSRN-AVPRFKLHVQVMDTTGSTSFI 408

Query: 529 LLDRTAKRIIGKTVTKLIADKIQNASSKEYPPKIKEIAGKYLTLKIQLNDENIQLHN 699
           L DR     +G++V  LI  + Q  +S  YP  ++ + GK +  K+ + + N+ LHN
Sbjct: 409 LFDRNVSNYVGRSVQDLIDAQGQGDNSLGYPADLEVLVGKKMLFKVDITNGNL-LHN 464


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