BLASTX nr result

ID: Cnidium21_contig00036271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036271
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39256.1| unknown [Lotus japonicus]                               85   7e-15
ref|XP_002517366.1| ring finger protein, putative [Ricinus commu...    74   1e-11
ref|XP_004142353.1| PREDICTED: RING-H2 finger protein ATL46-like...    73   3e-11
ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like...    66   3e-09
emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]    66   3e-09

>gb|AFK39256.1| unknown [Lotus japonicus]
          Length = 99

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/92 (51%), Positives = 56/92 (60%)
 Frame = -1

Query: 370 ETSLEVALNNVRDGSDAKLVKRKERSHSSFPXXXXXXXXGKKISIGTKTDSYSVSKIWLW 191
           ++ L++ LNN R   DAKL K  E                KKI    K +SYSVSKIWLW
Sbjct: 10  KSDLQITLNNDRKSCDAKLKKESENLEK---LSVEGDIEAKKIRRVGKGESYSVSKIWLW 66

Query: 190 SKKGQFSGSSDTQMDYPSSLDHELPWMRKTEG 95
           S+KG+FS SSD  M  PSSL+ ELPWMR+TEG
Sbjct: 67  SEKGKFSVSSDAGMGMPSSLNAELPWMRETEG 98


>ref|XP_002517366.1| ring finger protein, putative [Ricinus communis]
           gi|223543377|gb|EEF44908.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/91 (47%), Positives = 55/91 (60%)
 Frame = -1

Query: 370 ETSLEVALNNVRDGSDAKLVKRKERSHSSFPXXXXXXXXGKKISIGTKTDSYSVSKIWLW 191
           ++ L VAL   R     K  K  +++ S           GKKIS  TK +S+SVSKIWLW
Sbjct: 287 DSDLRVALCTDRHARSVKPEKGNDQNGSVL---VDGDLEGKKISRVTKRESFSVSKIWLW 343

Query: 190 SKKGQFSGSSDTQMDYPSSLDHELPWMRKTE 98
           SKKG+FS S+D QM  PSSL  +LPWM +T+
Sbjct: 344 SKKGKFSSSTDAQMGMPSSLSLDLPWMDRTQ 374


>ref|XP_004142353.1| PREDICTED: RING-H2 finger protein ATL46-like [Cucumis sativus]
           gi|449492685|ref|XP_004159071.1| PREDICTED: RING-H2
           finger protein ATL46-like [Cucumis sativus]
          Length = 375

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
 Frame = -1

Query: 370 ETSLEVALNNVRDGSDAKLVKRKERSHSSFPXXXXXXXXGKKISIGTKTDSYSVSKIWLW 191
           +  L +AL+  R   D     ++  S+S  P         KK+S   K +SYSVSKIWLW
Sbjct: 284 DADLRIALSKARGEGDNTQPSKEAESNSISPVQADLDG--KKLSSVAKGESYSVSKIWLW 341

Query: 190 SKKGQFSGSSDTQMDYPSSLDHEL-PWMRKTEG 95
           SKKG++SGS++  +  PSSL+ +L PW+R+T+G
Sbjct: 342 SKKGKYSGSTEPHIGMPSSLNTDLPPWLRQTQG 374


>ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 397

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -1

Query: 370 ETSLEVALNNVRDGSDAKLVKRKERSHSSFPXXXXXXXXGKKISIGTKTDSYSVSKIWLW 191
           ++ L VALN+ +   D K+VK  E + +           G + S  TK DSYSVSKIWLW
Sbjct: 308 DSILRVALNHEQQHPDGKIVKGIENNANP---SINEETEGTRNSFVTKGDSYSVSKIWLW 364

Query: 190 SKKGQFSGSSDTQMDYPSSLDHELPWM-RKTE 98
           SKKG+F  SSD       SL+ +LPWM RK E
Sbjct: 365 SKKGKFPSSSDNTQTGMPSLNVDLPWMGRKQE 396


>emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]
          Length = 1090

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
 Frame = -1

Query: 370  ETSLEVALNNVRDGSDAKLVKRKERSHSSFPXXXXXXXXGKKISIGTKTDSYSVSKIWLW 191
            ++ L VALN+ +   D K+VK  E + +           G + S  TK DSYSVSKIWLW
Sbjct: 1001 DSILRVALNHEQQHPDGKIVKGIENNANP---SINEETEGTRNSFVTKGDSYSVSKIWLW 1057

Query: 190  SKKGQFSGSSDTQMDYPSSLDHELPWM-RKTE 98
            SKKG+F  SSD       SL+ +LPWM RK E
Sbjct: 1058 SKKGKFPSSSDNTQTGMPSLNVDLPWMGRKQE 1089


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