BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036234
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871281.1| structural maintenance of chromosomes family...   169   4e-40
ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabi...   167   1e-39
gb|ACQ84165.1| truncated structural maintenance of chromosomes f...   167   1e-39
ref|XP_002866437.1| hypothetical protein ARALYDRAFT_496305 [Arab...   164   8e-39
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   160   2e-37

>ref|XP_002871281.1| structural maintenance of chromosomes family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297317118|gb|EFH47540.1|
           structural maintenance of chromosomes family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1063

 Score =  169 bits (427), Expect = 4e-40
 Identities = 77/93 (82%), Positives = 88/93 (94%)
 Frame = +1

Query: 259 AGIVSKIRLENFMCHSNLEIQLGDFINFVTGQNGSGKSAILTALCVAFGCRARGTQRASS 438
           +G + +IRLENFMCHSNLEI+ GD++NF+TGQNGSGKSAILTALCVAFGCRARGTQRA++
Sbjct: 19  SGTIVRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAAT 78

Query: 439 LKDFIKTGCSYALVHVELKNKGEDAFKPETYGE 537
           LKDFIK GCSYALVHVELKN+GEDAFKPE YG+
Sbjct: 79  LKDFIKNGCSYALVHVELKNQGEDAFKPEIYGD 111


>ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabidopsis thaliana]
           gi|9759587|dbj|BAB11444.1| SMC-like protein [Arabidopsis
           thaliana] gi|332003807|gb|AED91190.1| structural
           maintenance of chromosomes 6A [Arabidopsis thaliana]
          Length = 1058

 Score =  167 bits (424), Expect = 1e-39
 Identities = 77/93 (82%), Positives = 89/93 (95%)
 Frame = +1

Query: 259 AGIVSKIRLENFMCHSNLEIQLGDFINFVTGQNGSGKSAILTALCVAFGCRARGTQRASS 438
           +G + +IRLENFMCHSNLEI+ GD++NF+TGQNGSGKSAILTALCVAFGCRARGTQRA++
Sbjct: 20  SGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAAT 79

Query: 439 LKDFIKTGCSYALVHVELKNKGEDAFKPETYGE 537
           LKDFIKTGCSYALV+VELKN+GEDAFKPE YG+
Sbjct: 80  LKDFIKTGCSYALVYVELKNQGEDAFKPEIYGD 112


>gb|ACQ84165.1| truncated structural maintenance of chromosomes family protein 6A
           [Arabidopsis thaliana]
          Length = 876

 Score =  167 bits (424), Expect = 1e-39
 Identities = 77/93 (82%), Positives = 89/93 (95%)
 Frame = +1

Query: 259 AGIVSKIRLENFMCHSNLEIQLGDFINFVTGQNGSGKSAILTALCVAFGCRARGTQRASS 438
           +G + +IRLENFMCHSNLEI+ GD++NF+TGQNGSGKSAILTALCVAFGCRARGTQRA++
Sbjct: 20  SGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAAT 79

Query: 439 LKDFIKTGCSYALVHVELKNKGEDAFKPETYGE 537
           LKDFIKTGCSYALV+VELKN+GEDAFKPE YG+
Sbjct: 80  LKDFIKTGCSYALVYVELKNQGEDAFKPEIYGD 112


>ref|XP_002866437.1| hypothetical protein ARALYDRAFT_496305 [Arabidopsis lyrata subsp.
           lyrata] gi|297312272|gb|EFH42696.1| hypothetical protein
           ARALYDRAFT_496305 [Arabidopsis lyrata subsp. lyrata]
          Length = 1057

 Score =  164 bits (416), Expect = 8e-39
 Identities = 73/93 (78%), Positives = 88/93 (94%)
 Frame = +1

Query: 259 AGIVSKIRLENFMCHSNLEIQLGDFINFVTGQNGSGKSAILTALCVAFGCRARGTQRASS 438
           +G + +I++ENFMCHSNL+I+ G+++NF+TGQNGSGKSAILTALCVAFGCRARGTQRA++
Sbjct: 19  SGTILRIKVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAAT 78

Query: 439 LKDFIKTGCSYALVHVELKNKGEDAFKPETYGE 537
           LKDFIKTGCSYA+VHVE+KN GEDAFKPE YGE
Sbjct: 79  LKDFIKTGCSYAVVHVEMKNNGEDAFKPEIYGE 111


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score =  160 bits (404), Expect = 2e-37
 Identities = 76/105 (72%), Positives = 89/105 (84%)
 Frame = +1

Query: 223 MVDSRVHSGANRAGIVSKIRLENFMCHSNLEIQLGDFINFVTGQNGSGKSAILTALCVAF 402
           M DSR     + AGIV  IRLENFMCHSNL IQ G+++NF+TGQNGSGKSAILTALCVAF
Sbjct: 1   MADSRALPHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILTALCVAF 60

Query: 403 GCRARGTQRASSLKDFIKTGCSYALVHVELKNKGEDAFKPETYGE 537
           GCRA+GTQRA++LKDFIKTGCS+A++HV L+N GEDAFK   YG+
Sbjct: 61  GCRAKGTQRAATLKDFIKTGCSHAVIHVVLQNNGEDAFKHGIYGD 105