BLASTX nr result

ID: Cnidium21_contig00036232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036232
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL98901.1| WD repeat-containing protein LWD1, partial [Silen...   256   4e-66
dbj|BAE94397.1| WD40 repeat protein [Ipomoea purpurea] gi|979741...   254   1e-65
ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1...   254   1e-65
ref|XP_003548808.1| PREDICTED: WD repeat-containing protein LWD1...   254   1e-65
emb|CAN78873.1| hypothetical protein VITISV_021727 [Vitis vinifera]   254   1e-65

>gb|AEL98901.1| WD repeat-containing protein LWD1, partial [Silene latifolia]
           gi|343172396|gb|AEL98902.1| WD repeat-containing protein
           LWD1, partial [Silene latifolia]
          Length = 338

 Score =  256 bits (653), Expect = 4e-66
 Identities = 121/141 (85%), Positives = 133/141 (94%)
 Frame = +3

Query: 3   LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATVVMDSAKVVILDIRYPTLPVVELEG 182
           LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATV+MDSAKVV+LDIR+PTLPVVEL+ 
Sbjct: 198 LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATVIMDSAKVVVLDIRFPTLPVVELQR 257

Query: 183 HQGNANAIAWAPHSASHICSAGDDRQALIWDVSSIGKGGEGGLDPILAYTADAEIEQLQW 362
           HQ + NA+AWAPHS+ HIC+AGDD QALIWD+SS+G+  EGGLDPILAYTA AEIEQLQW
Sbjct: 258 HQSSVNALAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQW 317

Query: 363 SSSQPDWVAVAFSNKLQILRV 425
           SSSQPDWVA+AFSNKLQILRV
Sbjct: 318 SSSQPDWVAIAFSNKLQILRV 338


>dbj|BAE94397.1| WD40 repeat protein [Ipomoea purpurea] gi|97974167|dbj|BAE94399.1|
           WD40 repeat protein [Ipomoea nil]
          Length = 346

 Score =  254 bits (649), Expect = 1e-65
 Identities = 119/141 (84%), Positives = 133/141 (94%)
 Frame = +3

Query: 3   LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATVVMDSAKVVILDIRYPTLPVVELEG 182
           LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT++MDS+KVV+LDIR+PTLPVVEL+ 
Sbjct: 206 LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSSKVVVLDIRFPTLPVVELQR 265

Query: 183 HQGNANAIAWAPHSASHICSAGDDRQALIWDVSSIGKGGEGGLDPILAYTADAEIEQLQW 362
           HQ + NA+AWAPHS+ HIC+AGDD QALIWD+SS+G+  EGGLDPILAYTA AEIEQLQW
Sbjct: 266 HQASVNAVAWAPHSSCHICTAGDDSQALIWDLSSMGQPIEGGLDPILAYTAGAEIEQLQW 325

Query: 363 SSSQPDWVAVAFSNKLQILRV 425
           SSSQPDWVA+AFSNKLQILRV
Sbjct: 326 SSSQPDWVAIAFSNKLQILRV 346


>ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1-like [Cucumis sativus]
           gi|449501305|ref|XP_004161333.1| PREDICTED: WD
           repeat-containing protein LWD1-like [Cucumis sativus]
          Length = 346

 Score =  254 bits (648), Expect = 1e-65
 Identities = 120/141 (85%), Positives = 132/141 (93%)
 Frame = +3

Query: 3   LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATVVMDSAKVVILDIRYPTLPVVELEG 182
           LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT++MDSAKVV+LDIR+PTLPVVEL+ 
Sbjct: 206 LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQR 265

Query: 183 HQGNANAIAWAPHSASHICSAGDDRQALIWDVSSIGKGGEGGLDPILAYTADAEIEQLQW 362
           HQ + NAIAWAPHS+ HIC+AGDD QALIWD+SS+G+  EGGLDPILAYTA AEIEQLQW
Sbjct: 266 HQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQW 325

Query: 363 SSSQPDWVAVAFSNKLQILRV 425
           SSSQPDWVA+AFS KLQILRV
Sbjct: 326 SSSQPDWVAIAFSTKLQILRV 346


>ref|XP_003548808.1| PREDICTED: WD repeat-containing protein LWD1-like [Glycine max]
          Length = 344

 Score =  254 bits (648), Expect = 1e-65
 Identities = 120/141 (85%), Positives = 132/141 (93%)
 Frame = +3

Query: 3   LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATVVMDSAKVVILDIRYPTLPVVELEG 182
           LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT++MDSAKVV+LDIR+PTLPVVEL+ 
Sbjct: 204 LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQR 263

Query: 183 HQGNANAIAWAPHSASHICSAGDDRQALIWDVSSIGKGGEGGLDPILAYTADAEIEQLQW 362
           HQ + NAIAWAPHS+ HIC+AGDD QALIWD+SS+G+  EGGLDPILAYTA AEIEQLQW
Sbjct: 264 HQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQW 323

Query: 363 SSSQPDWVAVAFSNKLQILRV 425
           SSSQPDWVA+AFS KLQILRV
Sbjct: 324 SSSQPDWVAIAFSTKLQILRV 344


>emb|CAN78873.1| hypothetical protein VITISV_021727 [Vitis vinifera]
          Length = 314

 Score =  254 bits (648), Expect = 1e-65
 Identities = 120/141 (85%), Positives = 132/141 (93%)
 Frame = +3

Query: 3   LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATVVMDSAKVVILDIRYPTLPVVELEG 182
           LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMAT++MDSAKVV+LDIR+PTLPVVEL+ 
Sbjct: 174 LRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQR 233

Query: 183 HQGNANAIAWAPHSASHICSAGDDRQALIWDVSSIGKGGEGGLDPILAYTADAEIEQLQW 362
           HQ + NAIAWAPHS+ HIC+AGDD QALIWD+SS+G+  EGGLDPILAYTA AEIEQLQW
Sbjct: 234 HQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQW 293

Query: 363 SSSQPDWVAVAFSNKLQILRV 425
           SSSQPDWVA+AFS KLQILRV
Sbjct: 294 SSSQPDWVAIAFSTKLQILRV 314


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